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Protein Overview: CE31442

General Information:
Name(s) found: CE31442 [WormBase]
Description(s) found:
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  • WBGene00008085 status:Partially_confirmed UniProt:Q18616 protein_id:CAA93638.2 [WormBase]
  • gi|25147160|ref|NP_509956.2| hypothetical protein C44C10.4 [Caenorhabditis elegans] [NCBI NR]
  • gi|22265835|emb|CAA93638.2| C. elegans protein C44C10.4, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • [wormpep88.fasta]
  • CE31442 WBGene00008085 chromosome segregation protein like status:Partially_confirmed TR:Q18616 protein_id:CAA93638.2 [wormpep150.fasta]
  • 31442 WBGene00008085 chromosome segregation protein like status:Partially_confirmed TR:Q18616 protein_id:CAA93638.2 [wormpep130-phg-ecoli-orf-rand.fasta]
  • SMC protein, N-terminal and structural maintenance of chromosome protein SMC, C-terminal family member (XM309) [Caenorhabditis elegans]gi|22265835|emb|CAA93638.2| Hypothetical protein C44C10.4 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • chromosome segregation protein like status:Partially_confirmed TR:Q18616 protein_id:CAA93638.2 [wormpep115.fasta.reversed]
  • CE31442 WBGene00008085 chromosome segregation protein like status:Partially_confirmed UniProt:Q18616_CAEEL protein_id:CAA93638.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE31442 WBGene00008085 chromosome segregation protein like status:Partially_confirmed UniProt:Q18616_CAEEL protein_id:CAA93638.2| [wormORF-contam.fasta]
  • C44C10.4 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein C44C10.4 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE31442 WBGene00008085 chromosome segregation protein like status:Partially_confirmed UniProt:Q18616 protein_id:CAA93638.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE31442 WBGene00008085 status:Partially_confirmed UniProt:Q18616 protein_id:CAA93638.2 [wormpep246-ecoli-contam.fasta]
  • Uncharacterized protein OS=Caenorhabditis elegans GN=C44C10.4 PE=1 SV=2 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 537 amino acids

    Gene Ontology:
    Cellular Component: chromosome [IEALink to PubMed article]
    Biological Process: DNA metabolic process [IEALink to PubMed article]
    Molecular Function: ATP binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTYPQQRLLT VDILNFKCYQ HHKSFGPFDH VTTFIGMNGC GKSIMIEAIA FVFGEDLPDP  60
   61 KNPHNEHLFY DYNIRCVVSL KFEMPDGSTK RFTRIGLKTT YTYMIFNKYV TEEEYLLELG 120
  121 KMNFRFAGQN ISVYNKTTLK VTRKSAEELG AFFDIVSNSI EFKPEYDELK AKLNFAESTV 180
  181 LRWAKMIDSI ELEKEKFITL TLYKLYLCDK EIQETKEKFV AEQLKVNAKN AKMPLRISRY 240
  241 SEAIPKQTPS PNFKNNAIVV RPKTHNHYDN LITVDKLNSY LNEKVTERRE LLQFAVNHPN 300
  301 MNIRFSEEGP NIYAREIDYT ELPEYYKKES DDIIATSYKR SMLEKEIKKI RQCWLDENNI 360
  361 KDDANIDNIN MRIKEATTKH TLALNIESEA RLNWEKLRVM RSARFNNFMA PLQTSLSRIY 420
  421 AEIAQDEDSL AFLRPLDEEE PYLAIDAFVK ERHSEHISTR TFHGGSRMIV DLALIFAIHE 480
  481 WKPSPLVVID DIDRNLYHEA SKKIEPYLSR QKQTQFIVTT KEDSYFTEVT KTITLEN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..317] PSI-BLAST 20.09691 Sc Smc1hd:Scc1-C complex, ATPgS
    2 View Details [318..380] deduced N/A No confident structure predictions are available.
    3 View Details [381..537] PSI-BLAST 14.09691 No description for 2hydA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.470983068319171 bayes_pls_golite062009
  • hydrolase activity
    		•  0.0582794297634999 bayes_pls_golite062009
    2 No functions predicted.
    3
    Term Confidence Notes
  • catalytic activity
    		•  0.470983068319171 bayes_pls_golite062009
  • hydrolase activity
    		•  0.0582794297634999 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle