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Protein Overview: CE31415

General Information:
Name(s) found: CE31415 [WormBase]
Description(s) found:
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  • WBGene00007577 locus:nrde-1 status:Partially_confirmed UniProt:Q17968 protein_id:CAA85492.2 [WormBase]
  • gi|25145357|ref|NP_497752.2| hypothetical protein C14B1.6 [Caenorhabditis elegans] [NCBI NR]
  • gi|22265743|emb|CAA85492.2| C. elegans protein C14B1.6, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • [wormpep88.fasta]
  • CE31415 WBGene00007577 status:Partially_confirmed TR:Q17968 protein_id:CAA85492.2 [wormpep150.fasta]
  • 31415 WBGene00007577 status:Partially_confirmed TR:Q17968 protein_id:CAA85492.2 [wormpep130-phg-ecoli-orf-rand.fasta]
  • putative cytoplasmic protein, with 2 coiled coil-4 domains (93.4 kD) (3E807) [Caenorhabditis elegans]gi|22265743|emb|CAA85492.2| Hypothetical protein C14B1.6 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • status:Partially_confirmed TR:Q17968 protein_id:CAA85492.2 [wormpep115.fasta.reversed]
  • CE31415 WBGene00007577 status:Partially_confirmed UniProt:Q17968_CAEEL protein_id:CAA85492.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE31415 WBGene00007577 status:Partially_confirmed UniProt:Q17968_CAEEL protein_id:CAA85492.2| [wormORF-contam.fasta]
  • C14B1.6 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein C14B1.6 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE31415 WBGene00007577 status:Partially_confirmed UniProt:Q17968 protein_id:CAA85492.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE31415 WBGene00007577 locus:nrde-1 status:Partially_confirmed UniProt:Q17968 protein_id:CAA85492.2 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Uncharacterized protein OS=Caenorhabditis elegans GN=nrde-1 PE=1 SV=3 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 793 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEALink to PubMed article]
    Biological Process: phosphate metabolic process [IEALink to PubMed article]
    Molecular Function: magnesium ion binding [IEALink to PubMed article]
    inorganic diphosphatase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIDWLNAIP DSEDSEEDEE ERQERARLLK EKEEEREACK KRYLERIERE EAQRFGKQFK  60
   61 IDPLTFAERL ERKLIPAEKK QRYREFIPCV VDHFGGTDVH FVKAMESIKT ENQLLDFLTA 120
  121 AHKPLIEQTE DSVLHDWLAE FYKETVTSLL EMTSITDHDL KCFKVGNVFD EVRTNAIQKK 180
  181 VQKMEMENFA ERVREAKIKE AEERKATAEA TRDVLESLEG MTLSHVKHDE LEDELNTIAL 240
  241 EELHSTTRDT SPPRTRLSTR AQSQLNAMVK HLFVPAAPTT STEVPMEMDK DDDEMDAYDD 300
  301 SDLKILFSST TKESLKMEMG EENDECNFEP SQVSKYPSFQ ASSQFDETRR YDYDEEGDNK 360
  361 ELARLRRPTW RKILNYEKRI GTNFHRFTNA ENANLWRRNL YEDKRKKTSK VQFVDYDSPL 420
  421 NKMRLFVRPN EQFFNADDGP MTDRIDFSLS DGFNVLATRK IMSPLVCGSN YDCEFMARTR 480
  481 EGPQYLVRKT QSWMHSYCGN ILGRFWYLRD RHADKYPGVK DSNYDQKRRQ NFGLLRYYTL 540
  541 EELIEVFGLL LPDVQIAMRR GVRRENMPVS TVVKLKEKDR EAVESPVQGV LLLTDWRLVH 600
  601 LFDNTAIVNA IIHYFPTNLG GVFFEAMTEY LTELLLDNTI EFHTIIFAFG GTPTFKKQDF 660
  661 LAFWKKLIVR TTQSIDVFWM AQDWCDGLNS TQEEIDQLNE FNHYVEQMFT MMRKNGNINY 720
  721 NYCDIRKQYN IPSLDPSFNR PNDFLLLEPI YRAYINHFVD ECNCYLKGPF VKCQPRVHNG 780
  781 YAQRNGTKLE FSK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-1 hcp1 IP from december2004 Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..276] MSA 1.003958 View MSA. No confident structure predictions are available.
    2 View Details [277..358] deduced N/A No confident structure predictions are available.
    3 View Details [359..518] deduced N/A No confident structure predictions are available.
    4 View Details [519..793] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle