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Protein Overview: kcnl-1

General Information:
Name(s) found: kcnl-1 / CE31870 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00007176 locus:kcnl-1 status:Confirmed UniProt:G5EDG3 protein_id:CAD54123.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 745 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: potassium ion transport [IEALink to PubMed article]
    Molecular Function: calcium-activated potassium channel activity [IEALink to PubMed article]
    calmodulin binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVRASSYCQ MDDRIPFLTP QLNSHSHSRL SAETEATSGN TLSSSLSTIP ITGQKFATPP  60
   61 NRVLVKGHTV STCSPRFGST SIPAPLDRRQ GRSCEFHTSD DDRHDRYDNP IAQVSSDILR 120
  121 VSGYTQQFRS LLTARFSPRR ESTPDVTVEA PEDENKNDDR YVNGGVRFDN DVIEEGTASG 180
  181 AASGGVGTPK KIAGFRRRQS GYGIAISSDS TAKMRCRLRK QLFIRRNKVC DISLFLAVLG 240
  241 LLLVIIDSEL TALSSSTGIT KDSPISIILR SACVVSTFFL ICCLINYHAI EVKIALIDSG 300
  301 ADDWRVAFST DRFIKMLIEV CVCMICPFPE IFSDGLMKMP YINADTRQVK MRDVPIDVLL 360
  361 SVPMFLRSYL VCRFMVLHSK QFQDAATRSI AALNRISMDF RFVIKTMMAD HPLRVLIVFT 420
  421 LSYWMCMSWM FTQCERYDGQ LEVEHYYLNS MWFIMVTFMS IGYGDIVPNT YCGRCLSITT 480
  481 GIVGAGVSSA LIAIISRKLE LSRAEKHVNN FMADSKLTNQ RKNAAASVLQ ETWFIHKYKK 540
  541 ALHKGDDLRL RHHQRRFLHS INEFRRIKWD QRKLQEKGNS LLDVGKLHSD MHETLWEMHR 600
  601 TQDHFISQID VLTQKIMELQ MTLNTRPPCC APPTSSSNDA YFSTSTQLGT VLPTVIPTIP 660
  661 LPPTQSPMLH ASQSHREPLQ VTTTTTTSSD GLPRISVGST SSTATSASSG NGSLPQCTVD 720
  721 QLSNCPTGGI YATVTTPLIS NFEEV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..100] deduced N/A No confident structure predictions are available.
    2 View Details [101..588] PSI-BLAST 58.522879 Mammalian Shaker Kv1.2 potassium channel- beta subunit complex
    3 View Details [589..745] PSI-BLAST 18.30103 No description for 2q0aA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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