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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: kcnl-1
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVRASSYCQ MDDRIPFLTP QLNSHSHSRL SAETEATSGN TLSSSLSTIP ITGQKFATPP  60
   61 NRVLVKGHTV STCSPRFGST SIPAPLDRRQ GRSCEFHTSD DDRHDRYDNP IAQVSSDILR 120
  121 VSGYTQQFRS LLTARFSPRR ESTPDVTVEA PEDENKNDDR YVNGGVRFDN DVIEEGTASG 180
  181 AASGGVGTPK KIAGFRRRQS GYGIAISSDS TAKMRCRLRK QLFIRRNKVC DISLFLAVLG 240
  241 LLLVIIDSEL TALSSSTGIT KDSPISIILR SACVVSTFFL ICCLINYHAI EVKIALIDSG 300
  301 ADDWRVAFST DRFIKMLIEV CVCMICPFPE IFSDGLMKMP YINADTRQVK MRDVPIDVLL 360
  361 SVPMFLRSYL VCRFMVLHSK QFQDAATRSI AALNRISMDF RFVIKTMMAD HPLRVLIVFT 420
  421 LSYWMCMSWM FTQCERYDGQ LEVEHYYLNS MWFIMVTFMS IGYGDIVPNT YCGRCLSITT 480
  481 GIVGAGVSSA LIAIISRKLE LSRAEKHVNN FMADSKLTNQ RKNAAASVLQ ETWFIHKYKK 540
  541 ALHKGDDLRL RHHQRRFLHS INEFRRIKWD QRKLQEKGNS LLDVGKLHSD MHETLWEMHR 600
  601 TQDHFISQID VLTQKIMELQ MTLNTRPPCC APPTSSSNDA YFSTSTQLGT VLPTVIPTIP 660
  661 LPPTQSPMLH ASQSHREPLQ VTTTTTTSSD GLPRISVGST SSTATSASSG NGSLPQCTVD 720
  721 QLSNCPTGGI YATVTTPLIS NFEEV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle