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Protein Overview: hrpf-2

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run None Entered No Comments Cheeseman, I.M., et al. (2004)
View Run hcp-1 hcp1 IP from december2004 Cheeseman, I.M., et al. (2005)
View Run hcp-2 hcp2 ip from december Cheeseman, I.M., et al. (2005)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..242] PSI-BLAST 55.39794 Crystal Structure of UP1 Complexed With d(TTAGGGTTAG(6-MI)G); A Human Telomeric Repeat Containing 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine (6-MI)
2 View Details [243..417] FFAS03 3.98 Nuclear ribonucleoprotein A1 (RNP A1, UP1)
3 View Details [418..610] PSI-BLAST 5.69897 Sec24

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • binding
  • 2.10590295737522 bayes_pls_golite062009
  • nucleic acid binding
  • 1.43479844212501 bayes_pls_golite062009
  • RNA binding
  • 0.426544317458995 bayes_pls_golite062009
  • protein binding
  • 0.303849616374798 bayes_pls_golite062009
    2
    Term Confidence Notes
  • binding
  • 1.94223327190566 bayes_pls_golite062009
  • nucleic acid binding
  • 1.16612452230529 bayes_pls_golite062009
  • protein binding
  • 0.239750622810233 bayes_pls_golite062009
  • RNA binding
  • 0.0177644575880578 bayes_pls_golite062009
    3 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle