Protein Overview: sbds-1

General Information:
Name(s) found:	sbds-1 / CE30118 [WormBase]
Description(s) found: SHOW ONLY BEST	WBGene00021063 locus:sbds-1 Ribosome maturation protein SBDS status:Confirmed UniProt:Q23202 protein_id:CCD63990.1 [WormBase] gi\|25144459\|ref\|NP_497226.2\| Shwachman-Bodian-Diamond Syndrome protein homolog family member (sbds-1) [Caenorhabditis elegans] [NCBI NR] gi\|21431958\|sp\|Q23202.2\|SBDS_CAEEL RecName: Full=Ribosome maturation protein SBDS; AltName: Full=Shwachman-Bodian-Diamond syndrome protein homolog [NCBI NR] gi\|17402850\|gb\|AAK29863.2\| Shwachman-bodian-diamond syndrome protein homolog protein 1, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR] UPF0023 protein W06E11.4 - Caenorhabditis elegans [Swiss-Prot] Ribosome maturation protein SBDS OS=Caenorhabditis elegans GN=sbds-1 PE=3 SV=2 [Swiss-Prot] [wormpep79.fasta] CE30118 WBGene00021063 status:Confirmed SW:Q23202 protein_id:AAK29863.2 [wormpep150.fasta] 30118 WBGene00021063 status:Confirmed SW:Q23202 protein_id:AAK29863.2 [wormpep130-phg-ecoli-orf-rand.fasta] Shwachman-Bodian-Diamond syndrome protein like (28.5 kD) (3B254) [Caenorhabditis elegans]gi\|17402850\|gb\|AAK29863.2\| Hypothetical protein W06E11.4 [Caenorhabditis elegans]gi\|21431958\|sp\|Q23202\|YOM4_CAEEL Hypothetical UPF0023 protein W06E11.4 in chromosom [nrdb_11152004_Chlamydomonas] status:Confirmed SW:Q23202 protein_id:AAK29863.2 [wormpep115.fasta.reversed] CE30118 status:Confirmed SW:Q23202 protein_id:AAK29863.2 [wormpep80.hongbin] CE30118 WBGene00021063 locus:sbds-1 status:Confirmed UniProt:SBDS_CAEEL protein_id:AAK29863.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta] CE30118 WBGene00021063 status:Confirmed UniProt:SBDS_CAEEL protein_id:AAK29863.2\| [wormORF-contam.fasta] UPF0023 protein W06E11.4 [nr-271106-contam.fasta] W06E11.4 [Caenorhabditis elegans] [nr-271106-contam.fasta] Hypothetical protein W06E11.4 [Caenorhabditis elegans] [nr-271106-contam.fasta] CE30118 WBGene00021063 locus:sbds-1 status:Confirmed UniProt:Q23202 protein_id:AAK29863.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta] [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr] CE30118 WBGene00021063 locus:sbds-1 status:Confirmed UniProt:Q23202 protein_id:CCD63990.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta] CE30118 WBGene00021063 locus:sbds-1 status:Confirmed UniProt:Q23202 protein_id:CCD63990.1 Ribosome maturation protein SBDS [wormpep246-ecoli-contam.fasta]
Organism:	Caenorhabditis elegans
Length:	253 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	determination of adult lifespan [IMP]
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKNIKTPTN QKVLTNVAVV RMKKTGKRFE IACYKNKVVN WRNKSEKDID EVLQTHTVFS  60
   61 NVSKGQLSKK EELIAAFGIE DQLEICKIIL DKGDLQVSEK ERQAASDQSL KEVSQLIASM 120
  121 VVNPETKRPV PPSVIDKALQ EMHFSLKPNR SSKQQALDAI PKLRETLKIE RAKMKIRVAI 180
  181 PTKEAKSVHT KLKTLFSDVE VDDWQDGSLE MVGLIEPGSF RALDDLVRNE TKGHGRLEIL 240
  241 SLKDVVEGEL QIS

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..253]	PSI-BLAST	75.221849	Structure of a hypothetical protein AF0491 from Archaeoglobus fulgidus

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Protein Overview: sbds-1

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: