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Protein Overview: twk-13

General Information:
Name(s) found: twk-13 / CE30561 [WormBase]
Description(s) found:
Found 17 descriptions.
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  • WBGene00006668 locus:twk-13 status:Partially_confirmed UniProt:Q21729 protein_id:CAA98957.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 567 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    integral to membrane [IEALink to PubMed article]
    Biological Process: potassium ion transport [IEALink to PubMed article]
    Molecular Function: potassium channel activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFARAKFAHH IYRRAERLNL YLDKEEGEIE NLEEEIDETT EKKWWLRTKR WFRLALPHFG  60
   61 LVLLSIGYTL IGALCFHHYE KPYEQQLRNE TSRRIGELKN RVMDQLWRMS NNGTAYSTWR 120
  121 QTANDGMDEL IRDVFWDYTR NYMTPDDVIY GDGPIKWSFM SSIFFSWTAI TTIGYGHIVP 180
  181 RTDEGRVAII FYALLGIPLI LVTIADIGRF LATYIIKLHH GYMAVMSFVT NSCLKCIKWA 240
  241 CCWIRLPRRH IPMPTLELLQ RTQKLYPNNN NPTVAATAAS AGGGTGRRKK QQRDNVSDAG 300
  301 TFDNISEIND GSEGGENENE GEEEEQIQFD PSNHEKRVSV LFILLIMLGY VAGGAYIVRW 360
  361 WEEWTFFEAF YFCFVTVTTI GFGDIVPANV DWLPATLAYI VFGLIITTMC IDLVGSEYIR 420
  421 DIHFYGRSLG RQFMTIGGKV VHLGEVFGYV AFLQKNYGLT AEQLTKLSQL PEEYLLDCLI 480
  481 NGRQPDLNWI GGRPYVPPDI YYFKWIEHPR TLSFASDRVL QSMESLDLNT SRCSTARTLT 540
  541 PREYYQKILF QYCKQLQPEE PIADIDN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..243] PSI-BLAST 30.221849 Mammalian Shaker Kv1.2 potassium channel- beta subunit complex
    2 View Details [244..312] deduced N/A No confident structure predictions are available.
    3 View Details [313..567] PSI-BLAST 18.69897 Potassium channel-related protein MthK

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • catalytic activity
    		•  1.26736023026862 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.68812524232244 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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