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Protein Overview: CE30088

General Information:
Name(s) found: CE30088 [WormBase]
Description(s) found:
Found 19 descriptions.
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  • WBGene00019351 locus:lron-7 status:Confirmed UniProt:Q21164 protein_id:CCD72539.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 586 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: lipid catabolic process [IEALink to PubMed article]
    phospholipid metabolic process [IEALink to PubMed article]
    Molecular Function: phospholipase A2 activity [IEALink to PubMed article]
    protein binding [IEALink to PubMed article]
    calcium ion binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLKFALLFL ILVVYSFAYN PVKSNDKDKA LADNSKKVKV KKAELTAAQD EDDEGSKSLD  60
   61 EVEEDAGIDD DEQDDDEDVK EVPKKKSHVK QKKSKKPPAK KDKTRKSKKN DQEITEELKD 120
  121 EIEEEDDSNE YQACNADTSP DNELCHCDVH EIDCSEITME SGDPYLRTLD VAIMKKDFEP 180
  181 ITAKFTKNKI SRLQNDKVLP KFEKFVSILD VSYNEIRFID NDVFKPFTNL TKLYLSHNVL 240
  241 QTVKKDVFDA AKNTLHRLDL GYNRIKVVSD NSFDTLSKLK VLSLDGNPIK AWRKEMFKGL 300
  301 DSLEELSLDN CNIENLPADI FEYLPKLVKL SLRENPLEEI PAVVAHLKSL KDIDLSVTNL 360
  361 TEIRDHAFAG DSDLEEIILE KMPFLTVVRD CGFCGLPQLK TLILNDNKYL QELHPNAFGY 420
  421 IKSQPGHKSA AITSLQIHNS NISTISEHMV DYDNLKTFQV GGNPWNCNCD TQFMLEEKFA 480
  481 FKQDSVAPKC TSPAGLNGRL LVTVRASDAC EDARFLGRSG RFSSVLGLAL LVGFIAIGTY 540
  541 YMVSSGKLER LVRRVRKEPE VTYTNLQNAG EDFALETDFQ PRPAEV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..510] PSI-BLAST 39.154902 The molecular structure of toll-like receptor 3 ligand binding domain
    2 View Details [511..586] PSI-BLAST 50.69897 No description for 2id5A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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    Created and Maintained by: Michael Riffle