YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE30088
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLKFALLFL ILVVYSFAYN PVKSNDKDKA LADNSKKVKV KKAELTAAQD EDDEGSKSLD  60
   61 EVEEDAGIDD DEQDDDEDVK EVPKKKSHVK QKKSKKPPAK KDKTRKSKKN DQEITEELKD 120
  121 EIEEEDDSNE YQACNADTSP DNELCHCDVH EIDCSEITME SGDPYLRTLD VAIMKKDFEP 180
  181 ITAKFTKNKI SRLQNDKVLP KFEKFVSILD VSYNEIRFID NDVFKPFTNL TKLYLSHNVL 240
  241 QTVKKDVFDA AKNTLHRLDL GYNRIKVVSD NSFDTLSKLK VLSLDGNPIK AWRKEMFKGL 300
  301 DSLEELSLDN CNIENLPADI FEYLPKLVKL SLRENPLEEI PAVVAHLKSL KDIDLSVTNL 360
  361 TEIRDHAFAG DSDLEEIILE KMPFLTVVRD CGFCGLPQLK TLILNDNKYL QELHPNAFGY 420
  421 IKSQPGHKSA AITSLQIHNS NISTISEHMV DYDNLKTFQV GGNPWNCNCD TQFMLEEKFA 480
  481 FKQDSVAPKC TSPAGLNGRL LVTVRASDAC EDARFLGRSG RFSSVLGLAL LVGFIAIGTY 540
  541 YMVSSGKLER LVRRVRKEPE VTYTNLQNAG EDFALETDFQ PRPAEV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle