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Protein Overview: ctbp-1

General Information:
Name(s) found: ctbp-1 / CE29966 [WormBase]
Description(s) found:
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  • WBGene00006424 locus:ctbp-1 C-terminal-binding protein 1 status:Partially_confirmed UniProt:Q20595 protein_id:CCD71569.1 [WormBase]
  • gi|25147481|ref|NP_508983.2| CTBP (CtBP) transcriptional co-repressor homolog family member (ctbp-1) [Caenorhabditis elegans] [NCBI NR]
  • gi|16950419|gb|AAC69110.3| Hypothetical protein F49E10.5 [Caenorhabditis elegans] [NCBI NR]
  • C-terminal-binding protein 1 OS=Caenorhabditis elegans GN=ctbp-1 PE=1 SV=3 [Swiss-Prot]
  • [wormpep79.fasta]
  • CE29966 WBGene00018642 dehydrogenase status:Partially_confirmed TR:Q20595 protein_id:AAC69110.3 [wormpep150.fasta]
  • 29966 WBGene00018642 dehydrogenase status:Partially_confirmed TR:Q20595 protein_id:AAC69110.3 [wormpep130-phg-ecoli-orf-rand.fasta]
  • c-terminal binding protein like (79.5 kD) (XG491) [Caenorhabditis elegans]gi|16950419|gb|AAC69110.3| Hypothetical protein F49E10.5 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • dehydrogenase status:Partially_confirmed TR:Q20595 protein_id:AAC69110.3 [wormpep115.fasta.reversed]
  • CE29966 dehydrogenase status:Partially_confirmed TR:Q20595 protein_id:AAC69110.3 [wormpep80.hongbin]
  • CE29966 WBGene00006424 locus:ctbp-1 dehydrogenase status:Partially_confirmed UniProt:Q20595_CAEEL protein_id:AAC69110.3 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE29966 WBGene00006424 locus:ctbp-1 dehydrogenase status:Partially_confirmed UniProt:Q20595_CAEEL protein_id:AAC69110.3| [wormORF-contam.fasta]
  • F49E10.5 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein F49E10.5 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE29966 WBGene00006424 locus:ctbp-1 dehydrogenase status:Partially_confirmed TR:Q20595 protein_id:AAC69110.3 [WormBase_C-elegans_wp180_08-19-2007_reversed.fasta]
  • CE29966 WBGene00006424 locus:ctbp-1 dehydrogenase status:Partially_confirmed UniProt:Q20595 protein_id:AAC69110.3 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE29966 WBGene00006424 locus:ctbp-1 dehydrogenase status:Partially_confirmed UniProt:Q20595 protein_id:CCD71569.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE29966 WBGene00006424 locus:ctbp-1 status:Partially_confirmed UniProt:Q20595 protein_id:CCD71569.1 C-terminal-binding protein 1 [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 727 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: metabolic process [IEALink to PubMed article]
    L-serine biosynthetic process [IEALink to PubMed article]
    Molecular Function: nucleic acid binding [IEALink to PubMed article]
    oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [IEALink to PubMed article]
    NAD or NADH binding [IEALink to PubMed article]
    cofactor binding [IEALink to PubMed article]
    phosphoglycerate dehydrogenase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTTCGFPNC KFRSRYRGLE DNRHFYRIPK RPLILRQRWL TAIGRTEETV VSQLRICSAH  60
   61 FEGGEKKEGD IPVPDPTVDK QIKIELPPKE SKNSDRRRKQ NIPARFPRPE SPSGDSPSYS 120
  121 KKSRSFRDFY PSLSSTPSFD PAQSPHTPHP PVLPDPQQAL NDILSMTSTR MNGPSSSRPL 180
  181 VALLDGRDCS VEMPILKDVA TVAFCDAQST QEIHEKVLNE AVAALMYHSI KLEKEDLEKF 240
  241 KVLKVVFRIG YGIDNIDVKA ATELGIAVCH APGDYVEDVA DSTLSLILDL FRRTYWHAKS 300
  301 YSETRKTIGA DQVRENAVGS KKVRGSVLGI LGCGRVGTAV GLRARAFGLH IIFYDPFVRE 360
  361 GHDKALGFER VYTMDEFMSR SDCISLHCNL GDETRGIINA DSLRQCKSGV YIVNTSHAGL 420
  421 INENDLAAAL KNGHVKGAAL DVHDSVRFDP NCLNPLVGCP NIINTPHSAW MTEASCKDLR 480
  481 INAAKEIRKA INGRCPQDLT HCINKEAVMR NSNPINRRTS SAHPLLNMGF PTLPNFPPMS 540
  541 MSPHFPYPNP LLAMGAQMGA LNPFMGNGAL PFNPAAALSS LAAAQAANAQ RGSPANRSSR 600
  601 SSPSPHTNKS SVSPGNNGHV KTEPSSPAAK IEVDIAENDK HSMMTFLQRL IAPNGDSGAS 660
  661 TADSGIEGGD KEKVQSDGDE NMEDMEVIDA EKLKEELNIG QLEEPEEISV GLNNGNRINI 720
  721 DEQPLAT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..164] PSI-BLAST 41.69897 No description for 2jm3A was found.
    2 View Details [165..513] PSI-BLAST 91.154902 Transcription corepressor CtbP
    3 View Details [514..727] MSA 8.226994 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle