| Protein: | ctbp-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 727 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ctbp-1.
| Description | E-value | Query Range |
Subject Range |
|
|
620.0 | [0..1] | [726..1] |
|
Region A: Residues: [1-164] |
1 11 21 31 41 51
| | | | | |
1 MPTTCGFPNC KFRSRYRGLE DNRHFYRIPK RPLILRQRWL TAIGRTEETV VSQLRICSAH 60
61 FEGGEKKEGD IPVPDPTVDK QIKIELPPKE SKNSDRRRKQ NIPARFPRPE SPSGDSPSYS 120
121 KKSRSFRDFY PSLSSTPSFD PAQSPHTPHP PVLPDPQQAL NDIL
|
| Detection Method: |  |
| Confidence: | 41.69897 |
| Match: | 2jm3A |
| Description: | No description for 2jm3A was found. |
|
Region A: Residues: [165-513] |
1 11 21 31 41 51
| | | | | |
1 SMTSTRMNGP SSSRPLVALL DGRDCSVEMP ILKDVATVAF CDAQSTQEIH EKVLNEAVAA 60
61 LMYHSIKLEK EDLEKFKVLK VVFRIGYGID NIDVKAATEL GIAVCHAPGD YVEDVADSTL 120
121 SLILDLFRRT YWHAKSYSET RKTIGADQVR ENAVGSKKVR GSVLGILGCG RVGTAVGLRA 180
181 RAFGLHIIFY DPFVREGHDK ALGFERVYTM DEFMSRSDCI SLHCNLGDET RGIINADSLR 240
241 QCKSGVYIVN TSHAGLINEN DLAAALKNGH VKGAALDVHD SVRFDPNCLN PLVGCPNIIN 300
301 TPHSAWMTEA SCKDLRINAA KEIRKAINGR CPQDLTHCIN KEAVMRNSN
|
| Detection Method: | |
| Confidence: | 91.154902 |
| Match: | 1hkuA |
| Description: | Transcription corepressor CtbP |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [514-727] |
1 11 21 31 41 51
| | | | | |
1 PINRRTSSAH PLLNMGFPTL PNFPPMSMSP HFPYPNPLLA MGAQMGALNP FMGNGALPFN 60
61 PAAALSSLAA AQAANAQRGS PANRSSRSSP SPHTNKSSVS PGNNGHVKTE PSSPAAKIEV 120
121 DIAENDKHSM MTFLQRLIAP NGDSGASTAD SGIEGGDKEK VQSDGDENME DMEVIDAEKL 180
181 KEELNIGQLE EPEEISVGLN NGNRINIDEQ PLAT
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
