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Protein Overview: dmd-5

General Information:
Name(s) found: dmd-5 / CE29753 [WormBase]
Description(s) found:
Found 20 descriptions.
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  • WBGene00017326 locus:dmd-5 status:Confirmed UniProt:Q19291 protein_id:CCD65032.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 280 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    Biological Process: sex differentiation [IEALink to PubMed article]
    locomotory behavior [IMPLink to PubMed article]
    hermaphrodite genitalia development [IMPLink to PubMed article]
    morphogenesis of an epithelium [IMPLink to PubMed article]
    regulation of transcription, DNA-dependent [IEALink to PubMed article]
    oviposition [IMPLink to PubMed article]
    Molecular Function: DNA binding [IEALink to PubMed article]
    transcription factor activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPVSPSSVSV LPPTSLEQIL RIRAERNQRT PKCARCRNHG TTSALKGHKR YCQWKDCMCA  60
   61 KCTLIAERQR VMAAQVALRR QQSQEERDAR DLEVLLGSAG NANDLLDILR LDAGEHHGKN 120
  121 HASPTTNNNN NTEEKYEDSQ GQRSSPSSPT GSETVVSTSS PPELSSESTP NTSGSVIPTS 180
  181 PVFKPNGYSS MPMFNPVYGR PFMRFPMFSV MPHFFGTPSM SDFASAASLA APPAFFSAQP 240
  241 TIATSSPSTI FPQTAPLDYS HRLMKNEEAE EEYRENDKTF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..110] FFAS03 2.68 DM domain of Doublesex (dsx)
    2 View Details [111..280] MSA 11.134996 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.552728695659152 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.62

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle