| Protein: | dmd-5 |
| Organism: | Caenorhabditis elegans |
| Length: | 280 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dmd-5.
| Description | E-value | Query Range |
Subject Range |
|
|
183.0 | [0..13] | [274..11] |
|
Region A: Residues: [1-110] |
1 11 21 31 41 51
| | | | | |
1 MPVSPSSVSV LPPTSLEQIL RIRAERNQRT PKCARCRNHG TTSALKGHKR YCQWKDCMCA 60
61 KCTLIAERQR VMAAQVALRR QQSQEERDAR DLEVLLGSAG NANDLLDILR
|
| Detection Method: |  |
| Confidence: | 2.68 |
| Match: | 1lpvA |
| Description: | DM domain of Doublesex (dsx) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.552728695659152 | bayes_pls_golite062009 |
|
Region A: Residues: [111-280] |
1 11 21 31 41 51
| | | | | |
1 LDAGEHHGKN HASPTTNNNN NTEEKYEDSQ GQRSSPSSPT GSETVVSTSS PPELSSESTP 60
61 NTSGSVIPTS PVFKPNGYSS MPMFNPVYGR PFMRFPMFSV MPHFFGTPSM SDFASAASLA 120
121 APPAFFSAQP TIATSSPSTI FPQTAPLDYS HRLMKNEEAE EEYRENDKTF
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
