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Protein Overview: sec-6

General Information:
Name(s) found: sec-6 / CE29752 [WormBase]
Description(s) found:
Found 21 descriptions.
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  • WBGene00017284 locus:sec-6 Exocyst complex component 3 status:Confirmed UniProt:Q19262 protein_id:CCD68758.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 796 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: locomotory behavior [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    growth [IMPLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVDVEEAAL EQVAALLQRP DQLEKLPELK KRADRKKLAV EAMLRTGVQG QLEGIRTAIA  60
   61 HLQTASDDIT AISQGVHDIR ERLGPFPQLK EKLRELRDAN ARHGQYAAAM ENLKHIFNLQ 120
  121 TTLQEIRDAL DDEKSGGNLL LAHKHIMDLE RARDELLAEV HKMSGTNTEK EQMLLVNFFK 180
  181 GVDSVVAELS KNMWFILGRT LEMVKGNEQG GGPQQVVTCL RIVEREERID KFYMEARSKN 240
  241 SSAFVPPGRP RNWKEKALRS LEKTVSNRVD GNQLEDRSLN KAWLARYLEV CKNVIMDDLQ 300
  301 LAKVAIPCFP PDWQIYDRYV HMYHTSVCRR LREVASEHLE KSELVQLMSW IKFYASEDML 360
  361 GHPKLRINAQ AILQDSPVLS RSTLNQLCDQ FVEMSRDDLK LWLKNTVSHE THDWYKNLRP 420
  421 SEDNHGYFYT DLPNTVFGML KDTVTLAKEV SVEVIPSIIN LTIQEFNELA GKYRDAFTAY 480
  481 KTDYFAERSK YQEFTSNIIA IANNLHTCIE STEKYKQQIR LSMEGEQNAA AAMTTPLASG 540
  541 RRTAVRQQQL IENMDALNTK WSNAASVAVN YLREEVITDI APSLVEIFSK KWLTGSAALE 600
  601 TVCMTISDYY HDHKHLRPVT RSTLLMDLQF RIVSEYLKAI ETKRVSLNSY EERALAGKRM 660
  661 KADVVRLDNL YAEFATSSDM ADQLPLLTSI VAAAGDVISL KDKSLLSLEA TSFARKFPNC 720
  721 PAELLSAVIA TRDDISGSEA RSLASEVLQH VQFHPKDQIF DQLFALRQQE NSERLPNLGM 780
  781 ANMFKADFMS MLKRDA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-2 hcp2 ip from december Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..375] PSI-BLAST 9.0 Heavy meromyosin subfragment
    2 View Details [376..796] PSI-BLAST 52.0 No description for 2fji1 was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle