| Protein: | sec-6 |
| Organism: | Caenorhabditis elegans |
| Length: | 796 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sec-6.
| Description | E-value | Query Range |
Subject Range |
|
|
537.0 | [0..4] | [785..32] |
|
Region A: Residues: [1-375] |
1 11 21 31 41 51
| | | | | |
1 MDVDVEEAAL EQVAALLQRP DQLEKLPELK KRADRKKLAV EAMLRTGVQG QLEGIRTAIA 60
61 HLQTASDDIT AISQGVHDIR ERLGPFPQLK EKLRELRDAN ARHGQYAAAM ENLKHIFNLQ 120
121 TTLQEIRDAL DDEKSGGNLL LAHKHIMDLE RARDELLAEV HKMSGTNTEK EQMLLVNFFK 180
181 GVDSVVAELS KNMWFILGRT LEMVKGNEQG GGPQQVVTCL RIVEREERID KFYMEARSKN 240
241 SSAFVPPGRP RNWKEKALRS LEKTVSNRVD GNQLEDRSLN KAWLARYLEV CKNVIMDDLQ 300
301 LAKVAIPCFP PDWQIYDRYV HMYHTSVCRR LREVASEHLE KSELVQLMSW IKFYASEDML 360
361 GHPKLRINAQ AILQD
|
| Detection Method: |  |
| Confidence: | 9.0 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [376-796] |
1 11 21 31 41 51
| | | | | |
1 SPVLSRSTLN QLCDQFVEMS RDDLKLWLKN TVSHETHDWY KNLRPSEDNH GYFYTDLPNT 60
61 VFGMLKDTVT LAKEVSVEVI PSIINLTIQE FNELAGKYRD AFTAYKTDYF AERSKYQEFT 120
121 SNIIAIANNL HTCIESTEKY KQQIRLSMEG EQNAAAAMTT PLASGRRTAV RQQQLIENMD 180
181 ALNTKWSNAA SVAVNYLREE VITDIAPSLV EIFSKKWLTG SAALETVCMT ISDYYHDHKH 240
241 LRPVTRSTLL MDLQFRIVSE YLKAIETKRV SLNSYEERAL AGKRMKADVV RLDNLYAEFA 300
301 TSSDMADQLP LLTSIVAAAG DVISLKDKSL LSLEATSFAR KFPNCPAELL SAVIATRDDI 360
361 SGSEARSLAS EVLQHVQFHP KDQIFDQLFA LRQQENSERL PNLGMANMFK ADFMSMLKRD 420
421 A
|
| Detection Method: | |
| Confidence: | 52.0 |
| Match: | 2fji1 |
| Description: | No description for 2fji1 was found. |
