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Protein Overview: duo-2

General Information:
Name(s) found: duo-2 / CE40673 [WormBase]
Description(s) found:
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  • WBGene00001111 locus:duo-2 status:Partially_confirmed UniProt:O76364 protein_id:CCD62183.1 [WormBase]
  • gi|193206212|ref|NP_499864.2| Deubiquitylating with USP/UBP and OTU domains family member (duo-2) [Caenorhabditis elegans] [NCBI NR]
  • gi|123721279|gb|AAC19188.2| Deubiquitylating with usp/ubp and otu domains protein 2 [Caenorhabditis elegans] [NCBI NR]
  • CE40673 WBGene00001111 locus:duo-2 status:Predicted UniProt:O76364_CAEEL protein_id:AAC19188.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE40673 WBGene00001111 locus:duo-2 status:Predicted UniProt:O76364_CAEEL protein_id:AAC19188.2| [wormORF-contam.fasta]
  • CE40673 WBGene00001111 locus:duo-2 status:Predicted TR:O76364 protein_id:AAC19188.2 [WormBase_C-elegans_wp180_08-19-2007_reversed.fasta]
  • CE40673 WBGene00001111 locus:duo-2 status:Partially_confirmed UniProt:O76364 protein_id:AAC19188.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
    • Organism: Caenorhabditis elegans
    Length: 551 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: ubiquitin-dependent protein catabolic process [IEALink to PubMed article]
    Molecular Function: ubiquitin thiolesterase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLQWNNVFH QRQDFVHSCT HRVERLLELE ELRKRLVNTG NSCYYNSTLQ AMSSCGPMVV  60
   61 RCENLYRMVR YKIRFLDNSL NINQTQPCDI KNNNIVLRNF LKIVSCLQLG GHLNEPNEVM 120
  121 KLSTSKLLQY RRNVGKIHEG FNNDDQHDAH EFFLTLIGAV DDVMKVVLEN AVMIDDFESP 180
  181 LNPAKVFKID VETLCLVVTL KRYELEGRGS RFSMKNKNCR VEPTFELDAT SLRNFMPVEC 240
  241 SELNKNDAHS NNSRLHIGAD EEVVQEDVTA RKQLFFDVFS NMADFDNTLV GMGFANGVNQ 300
  301 KRCHFKRERV AHISEMSQYQ LPGVTRKIEA DGNCFYRAVS WWLTGVESHH MIFREAVGKH 360
  361 LKKNEPKFKK YCHDEIYEKY VDNVMREGVW ASTCEIFAMA NMLNVAIMTY LGDSGWMPHS 420
  421 PQNTCPPRQG ALYLKNTHMH YESTISLKKN TSMKSTMTSQ KGNNNERLMH GELHEKDNMR 480
  481 GDAPPRRYTL VSVVCHLGSS PNKGHHVAYT KKSLDNDGWL RCSDDKLRDV SKENVANAVR 540
  541 SSGYVLYYIL Q

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..422] PSI-BLAST 23.0 Crystal structure of HAUSP
    2 View Details [423..551] FFAS03 6.06 Crystal structure of HAUSP


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle