YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CE29955

General Information:
Name(s) found: CE29955 [WormBase]
Description(s) found:
SHOW ONLY BEST
  • WBGene00017217 Uncharacterized protein F07F6.4 status:Partially_confirmed UniProt:Q09531 protein_id:CCD68748.1 [WormBase]
  • gi|25153991|ref|NP_495029.2| hypothetical protein F07F6.4 [Caenorhabditis elegans] [NCBI NR]
  • gi|21431921|sp|Q09531.2|YQP4_CAEEL RecName: Full=Uncharacterized protein F07F6.4 [NCBI NR]
  • gi|17402826|gb|AAL38955.1|U23486_3 Hypothetical protein F07F6.4 [Caenorhabditis elegans] [NCBI NR]
  • Uncharacterized protein F07F6.4 OS=Caenorhabditis elegans GN=F07F6.4 PE=3 SV=2 [Swiss-Prot]
  • [wormpep79.fasta]
  • CE29955 WBGene00017217 Zinc finger protein status:Partially_confirmed SW:Q09531 protein_id:AAL38955.1 [wormpep150.fasta]
  • 29955 WBGene00017217 Zinc finger protein status:Partially_confirmed SW:Q09531 protein_id:AAL38955.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • zinc finger protein 289 (57.9 kD) (2F716) [Caenorhabditis elegans]gi|17402826|gb|AAL38955.1| Hypothetical protein F07F6.4 [Caenorhabditis elegans]gi|21431921|sp|Q09531|YQP4_CAEEL Hypothetical protein F07F6.4 in chromosome III [nrdb_11152004_Chlamydomonas]
  • Zinc finger protein status:Partially_confirmed SW:Q09531 protein_id:AAL38955.1 [wormpep115.fasta.reversed]
  • CE29955 Zinc finger protein status:Partially_confirmed protein_id:AAL38955.1 [wormpep80.hongbin]
  • CE29955 WBGene00017217 Zinc finger protein status:Partially_confirmed UniProt:YQP4_CAEEL protein_id:AAL38955.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE29955 WBGene00017217 Zinc finger protein status:Partially_confirmed UniProt:YQP4_CAEEL protein_id:AAL38955.1| [wormORF-contam.fasta]
  • Hypothetical protein F07F6.4 in chromosome III [nr-271106-contam.fasta]
  • Hypothetical protein F07F6.4 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • F07F6.4 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE29955 WBGene00017217 Zinc finger protein status:Partially_confirmed UniProt:Q09531 protein_id:AAL38955.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE29955 WBGene00017217 Zinc finger protein status:Partially_confirmed UniProt:Q09531 protein_id:CCD68748.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE29955 WBGene00017217 status:Partially_confirmed UniProt:Q09531 protein_id:CCD68748.1 Uncharacterized protein F07F6.4 [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 529 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: regulation of GTPase activity [IEALink to PubMed article]
    Molecular Function: zinc ion binding [IEALink to PubMed article]
    ARF GTPase activator activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDENGPSKV DLQTAMRKMR ALPPNKLCFD CGARNPTWCT VTYGVFLCID CSAVHRNLGV  60
   61 HLTFVRSTNL DTNWTWLQLR AMQLGGNGNA NQFFKAHGCN TTEAQQKYKS RAAQMYRDKL 120
  121 STLCQEAQRK FGTQLIIDTV THAEEKPAEE EDFFAQDFGH TSASATSLSS DAYIADHKSE 180
  181 DSTHGPSVDH LDSSVAVPTS APVSVILKKP IKKATLGAKK NALGAQKVRI NFDEIEQRAA 240
  241 EKERQTAAEV AANKLAYQTE LDGKKKSDDA AALQKLSAKF AMQDIDAQRK QMEAKVAKDP 300
  301 TKAASVDRLG MGGVGRSRAA HSVAGGIRSI KQDDVLTFKK PSQPKEDDDW EVIDDKYGKK 360
  361 STNNEDDFFS KDYTSSSSKK TTKEDDFFDS FETQPVQKSR YTASSSSSST SRAPTTRLTA 420
  421 GASPISDVDL QKKFGNAKAI SSDMYFGTPE MDCETRSALT KCEGQTSFGS EDLWGNGSQQ 480
  481 RQSSQVPDMS DLKDSFRAGA SKVAEKWSTL SSSFSTYMSR APPATGEKT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..179] PSI-BLAST 37.221849 Solution structure of the ArfGap domain of ADP-ribosylation factor GTPaseactivating protein 3 (ArfGap 3)
    2 View Details [180..529] FFAS03 1.41 RecG, N-terminal domain; RecG "wedge" domain; RecG helicase domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.32660679690127 bayes_pls_golite062009
  • catalytic activity
    		•  0.0421422721706842 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle