| Protein: | CE29955 |
| Organism: | Caenorhabditis elegans |
| Length: | 529 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE29955.
| Description | E-value | Query Range |
Subject Range |
|
|
377.0 | [0..1] | [519..1] |
|
Region A: Residues: [1-179] |
1 11 21 31 41 51
| | | | | |
1 MSDENGPSKV DLQTAMRKMR ALPPNKLCFD CGARNPTWCT VTYGVFLCID CSAVHRNLGV 60
61 HLTFVRSTNL DTNWTWLQLR AMQLGGNGNA NQFFKAHGCN TTEAQQKYKS RAAQMYRDKL 120
121 STLCQEAQRK FGTQLIIDTV THAEEKPAEE EDFFAQDFGH TSASATSLSS DAYIADHKS
|
| Detection Method: |  |
| Confidence: | 37.221849 |
| Match: | 2crwA |
| Description: | Solution structure of the ArfGap domain of ADP-ribosylation factor GTPaseactivating protein 3 (ArfGap 3) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [180-529] |
1 11 21 31 41 51
| | | | | |
1 EDSTHGPSVD HLDSSVAVPT SAPVSVILKK PIKKATLGAK KNALGAQKVR INFDEIEQRA 60
61 AEKERQTAAE VAANKLAYQT ELDGKKKSDD AAALQKLSAK FAMQDIDAQR KQMEAKVAKD 120
121 PTKAASVDRL GMGGVGRSRA AHSVAGGIRS IKQDDVLTFK KPSQPKEDDD WEVIDDKYGK 180
181 KSTNNEDDFF SKDYTSSSSK KTTKEDDFFD SFETQPVQKS RYTASSSSSS TSRAPTTRLT 240
241 AGASPISDVD LQKKFGNAKA ISSDMYFGTP EMDCETRSAL TKCEGQTSFG SEDLWGNGSQ 300
301 QRQSSQVPDM SDLKDSFRAG ASKVAEKWST LSSSFSTYMS RAPPATGEKT
|
| Detection Method: | |
| Confidence: | 1.41 |
| Match: | 1gm5A |
| Description: | RecG, N-terminal domain; RecG "wedge" domain; RecG helicase domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.32660679690127 | bayes_pls_golite062009 |
| catalytic activity | 0.0421422721706842 | bayes_pls_golite062009 |
