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Protein Overview: dbr-1

General Information:
Name(s) found: dbr-1 / CE30437 [WormBase]
Description(s) found:
Found 22 descriptions.
SHOW ALL
  • WBGene00000937 locus:dbr-1 Lariat debranching enzyme status:Partially_confirmed UniProt:Q966M6 protein_id:CCD68095.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 500 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: locomotory behavior [IMPLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed articleLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    gamete generation [IMPLink to PubMed article]
    mRNA processing [IEALink to PubMed article]
    Molecular Function: hydrolase activity, acting on ester bonds [IEALink to PubMed article]
    hydrolase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSKNPVDEQ PCCGSHEGSH QDPAPETLVV EKEVNNGEKK IRIAVVGCSH GEMDAIYETM  60
   61 TLIEQKNGYK FDLLICCGDY QAVRNYGDLP HMSIPPKYRS LQTFYKYYSG EQKAPVLTLF 120
  121 IGGNHEASGY LCELPNGGWV APNIYYMGFA NCIRFANLRI AGLSGIFSQG DFQFSHYERP 180
  181 SFSERDVKSA YHVRNVDMFR LRQLKSDNEN KISNPIDIML SHDWPGGIPD FGDKEWLFRK 240
  241 KDLFEADHNS GKLGNPSGMK LIYDCRPRYY LAAHLHIAFA ALVPHKGSGS GRPQPTRFLS 300
  301 LDKPIPGRKF MQALELNVAD DAKLELSYDP QWLAILRNTD LLTTGTKEQL ILPDMASNRP 360
  361 CVYERKDFRP TAEELKEIEK LGDLTIRTDS FQQTAPPLKE ITESSKNVPP SAYYRNPQSA 420
  421 EFCQWLGIRD LNQMLVEKTS EHVGTPYYMM TQDDANAKPN QDDVDFGDED FVIDRGHTSD 480
  481 EPEAKKSRLD EDKFEAVPSE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..277] PSI-BLAST 5.69897 No description for 2yvtA was found.
    2 View Details [278..500] Pfam 107.0 No description for PF05011.4 was found. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity, acting on ester bonds
    		•  2.78838275355792 bayes_pls_golite062009
  • hydrolase activity
    		•  2.76303513476374 bayes_pls_golite062009
  • catalytic activity
    		•  1.39852585255405 bayes_pls_golite062009
  • binding
    		•  1.24690422779109 bayes_pls_golite062009
  • phosphoprotein phosphatase activity
    		•  1.23036240099336 bayes_pls_golite062009
  • protein serine/threonine phosphatase activity
    		•  1.1761660507432 bayes_pls_golite062009
  • phosphoric ester hydrolase activity
    		•  0.899406797746366 bayes_pls_golite062009
  • phosphatase activity
    		•  0.76188635342041 bayes_pls_golite062009
  • protein binding
    		•  0.184079020957384 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle