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Protein Overview: CE29722

General Information:
Name(s) found: CE29722 [WormBase]
Description(s) found:
Found 21 descriptions.
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  • WBGene00016674 Uncharacterized tRNA-dihydrouridine synthase-like protein C45G9.2 status:Confirmed UniProt:Q09504 protein_id:CCD67391.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 284 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: tRNA processing [IEALink to PubMed article]
    Molecular Function: oxidoreductase activity [IEALink to PubMed article]
    FAD binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRYSKLAFR QLVRVYDVDV CFTPMIYAKN FIESEKCRSS ELSVCEGDSP LIVQFATDDP  60
   61 FVLSEAAEMV YKCSTGVDLN CGCPKHDVRS KGFGSALLSK PELLADMVRQ TRARIPDPDF 120
  121 SVSLKIRINH DIEKTVDLCR KAEAAGVTHL TVHGRTPSQR AEPIDIQALR IVKDSVSVPI 180
  181 IANGGITTRE EALFLAEQTG VDGIMAANGL LDNPALFAGH EHTPSDCVEN FMRLSREYGL 240
  241 DWLLYHQHLQ YMLRPVFSAQ QRRVFNELNG RLAIDHFLNN LLDI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..284] PSI-BLAST 47.69897 Crystal structure of a putative flavin oxidoreductase with flavin

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.94749091175302 bayes_pls_golite062009
  • tRNA dihydrouridine synthase activity
    		•  1.94490879164338 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle