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Protein Overview: stam-1

General Information:
Name(s) found: stam-1 / CE29700 [WormBase]
Description(s) found:
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  • WBGene00004109 locus:stam-1 Signal transducing adapter molecule 1 status:Confirmed UniProt:O01498 protein_id:CCD66687.1 [WormBase]
  • gi|74955951|sp|O01498.2|STAM1_CAEEL RecName: Full=Signal transducing adapter molecule 1; Short=STAM-1; AltName: Full=Prion-like-(Q/N-rich) domain-bearing protein 19 [NCBI NR]
  • gi|25141270|ref|NP_491710.2| STAM (Signal Transducing Adapter Molecule) homolog family member (stam-1) [Caenorhabditis elegans] [NCBI NR]
  • gi|16259243|gb|AAB52480.2| Prion-like-(q/n-rich)-domain-bearing protein protein 19, isoform a [Caenorhabditis elegans] [NCBI NR]
  • Signal transducing adapter molecule 1 OS=Caenorhabditis elegans GN=stam-1 PE=1 SV=2 [Swiss-Prot]
  • [wormpep79.fasta]
  • CE29700 WBGene00004109 locus:pqn-19 status:Confirmed TR:O01498 protein_id:AAB52480.2 [wormpep150.fasta]
  • 29700 WBGene00004109 locus:pqn-19 status:Confirmed TR:O01498 protein_id:AAB52480.2 [wormpep130-phg-ecoli-orf-rand.fasta]
  • prion-like Q/N-rich domain protein PQN-19, Prion-like Q/N-rich domain protein, EAST-like signal transducing adaptor molecule (50.8 kD) (pqn-19) [Caenorhabditis elegans]gi|16259243|gb|AAB52480.2| Prion-like-(q/n-rich)-domain-bearing protein protein 19, is [nrdb_11152004_Chlamydomonas]
  • locus:pqn-19 status:Partially_confirmed TR:O01498 protein_id:AAB52480.2 [wormpep115.fasta.reversed]
  • CE29700 locus:pqn-19 status:Partially_confirmed [wormpep80.hongbin]
  • CE29700 WBGene00004109 locus:stam-1 status:Confirmed UniProt:O01498_CAEEL protein_id:AAB52480.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE29700 WBGene00004109 locus:stam-1 status:Confirmed UniProt:O01498_CAEEL protein_id:AAB52480.2| [wormORF-contam.fasta]
  • Prion-like-(Q/N-rich)-domain-bearing protein family member (pqn-19) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Prion-like-(q/n-rich)-domain-bearing protein protein 19, isoform a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE29700 WBGene00004109 locus:stam-1 status:Confirmed UniProt:O01498 protein_id:AAB52480.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE29700 WBGene00004109 locus:stam-1 status:Confirmed UniProt:STAM1_CAEEL protein_id:AAB52480.2 [wormbase_c-elegans_197_11-26-2008_reversed.fasta]
  • CE29700 WBGene00004109 locus:stam-1 status:Confirmed UniProt:O01498 protein_id:CCD66687.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE29700 WBGene00004109 locus:stam-1 status:Confirmed UniProt:O01498 protein_id:CCD66687.1 Signal transducing adapter molecule 1 [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 457 amino acids

    Gene Ontology:
    Cellular Component: early endosome [IDALink to PubMed article]
    Biological Process: intracellular protein transport [IEALink to PubMed article]
    Molecular Function: protein C-terminus binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKQKSFPMS AYEDLLGKIT APTITVENWE GILAFCDMIN NDFEGSKTGI KSLRKRLNNR  60
   61 DPHVVLLAIS VLDSCWANCE ERFRKEVSSA QFINELKALC TSSQRQVAEK MRLTVQKWVD 120
  121 TECKTEQSLS LIVTLHKNLV ADGYSFVVDD PKSKTKAIDA KFANDPNYVG SAQEEEAIAK 180
  181 AIAASLADAE KQEKAKKSTS TMYPSAKASS PAVQTNSNIP EKNVRALYDF EAAESNELSF 240
  241 VAGDIITITD ESNPHWWTGR IGTQQGLFPS SFVTNQLDDL KSKETDSSQK APEVVASINE 300
  301 AILVRCLQVL HECDPTGERQ DPEDLAQLEA ASYAQGNLID AHLASIDRQS NSLAQIDVAI 360
  361 RDVLALYDDA IQKGGFQHQS QGMYQQPMQQ YNYQQPPNRA YYPPTGPVQQ QQPQQYPPQH 420
  421 YPAPGAQPQY ACPPNSVPQP QQQQQQWPAP SSQPQQY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-1 hcp1 IP from december2004 Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..78] PSI-BLAST 36.09691 Hrs
    2 View Details [79..276] PSI-BLAST 8.30103 No description for 2dybA was found.
    3 View Details [277..457] PSI-BLAST 14.09691 No description for 2pz1A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle