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Protein Overview: stam-1

General Information:
Name(s) found: stam-1 / CE29700 [WormBase]
Description(s) found:
Found 20 descriptions.
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  • WBGene00004109 locus:stam-1 Signal transducing adapter molecule 1 status:Confirmed UniProt:O01498 protein_id:CCD66687.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 457 amino acids

    Gene Ontology:
    Cellular Component: early endosome [IDALink to PubMed article]
    Biological Process: intracellular protein transport [IEALink to PubMed article]
    Molecular Function: protein C-terminus binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKQKSFPMS AYEDLLGKIT APTITVENWE GILAFCDMIN NDFEGSKTGI KSLRKRLNNR  60
   61 DPHVVLLAIS VLDSCWANCE ERFRKEVSSA QFINELKALC TSSQRQVAEK MRLTVQKWVD 120
  121 TECKTEQSLS LIVTLHKNLV ADGYSFVVDD PKSKTKAIDA KFANDPNYVG SAQEEEAIAK 180
  181 AIAASLADAE KQEKAKKSTS TMYPSAKASS PAVQTNSNIP EKNVRALYDF EAAESNELSF 240
  241 VAGDIITITD ESNPHWWTGR IGTQQGLFPS SFVTNQLDDL KSKETDSSQK APEVVASINE 300
  301 AILVRCLQVL HECDPTGERQ DPEDLAQLEA ASYAQGNLID AHLASIDRQS NSLAQIDVAI 360
  361 RDVLALYDDA IQKGGFQHQS QGMYQQPMQQ YNYQQPPNRA YYPPTGPVQQ QQPQQYPPQH 420
  421 YPAPGAQPQY ACPPNSVPQP QQQQQQWPAP SSQPQQY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-1 hcp1 IP from december2004 Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..78] PSI-BLAST 36.09691 Hrs
    2 View Details [79..276] PSI-BLAST 8.30103 No description for 2dybA was found.
    3 View Details [277..457] PSI-BLAST 14.09691 No description for 2pz1A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle