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Protein Overview: vha-16

General Information:
Name(s) found: vha-16 / CE29684 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00016258 locus:vha-16 status:Confirmed UniProt:Q95YD5 protein_id:CCD66185.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 348 amino acids

    Gene Ontology:
    Cellular Component: proton-transporting two-sector ATPase complex [IEALink to PubMed article]
    Biological Process: nematode larval development [IMPLink to PubMed article]
    ATP synthesis coupled proton transport [IEALink to PubMed article]
    growth [IMPLink to PubMed article]
    reproduction [IMPLink to PubMed article]
    Molecular Function: proton-transporting ATPase activity, rotational mechanism [IEALink to PubMed article]
    hydrogen ion transporting ATP synthase activity, rotational mechanism [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGEFLFNIDH GYLEALTRGL KGGLLAQADY ANLVQCETLE DLKLHIQSTD YGNFLANEPG  60
   61 AITVQVIDEK LKEKLVTEFT HLRNNALEPL ATFLDYITYS YMIDNIILLI TGTLHQRPIS 120
  121 ELINKCHPLG SFEQMEAIHI ASTPAELYNA VLVDTPLANY FVDCINEQDL DEMNVEVIRN 180
  181 TLYKAYIEDF YKFCAGLGGK TAEVMCDILA FEADRRSIII TINSFDTELS KDDRQKLYPR 240
  241 CGKLFPDGLT GLSRADDYDQ VKQVCEFYSD YKPLFEGSGN GPGEKTLEDK FFEHEVKLNV 300
  301 HSYLHQFHFG VFYAFIKLKE QEMRNIIWIA ECISQRHRTK IDNYIPIM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..348] PSI-BLAST 48.0 Crystal Structure of Subunit C of V-ATPase


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle