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Protein Overview: gar-1

General Information:
Name(s) found: gar-1 / CE29668 [WormBase]
Description(s) found:
Found 21 descriptions.
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  • WBGene00001517 locus:gar-1 Probable muscarinic acetylcholine receptor gar-1 status:Confirmed UniProt:Q18007 protein_id:CCD64568.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 622 amino acids

    Gene Ontology:
    Cellular Component: postsynaptic membrane [IDALink to PubMed article]
    integral to membrane [IEALink to PubMed article]
    Biological Process: synaptic transmission, cholinergic [IDALink to PubMed article]
    G-protein coupled receptor protein signaling pathway [IEALink to PubMed article]
    Molecular Function: G-protein coupled acetylcholine receptor activity [IDALink to PubMed article]
    rhodopsin-like receptor activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPNYTVPPDP ADTSWDSPYS IPVQIVVWII IIVLSLETII GNAMVVMAYR IERNISKQVS  60
   61 NRYIVSLAIS DLIIGIEGFP FFTVYVLNGD RWPLGWVACQ TWLFLDYTLC LVSILTVLLI 120
  121 TADRYLSVCH TAKYLKWQSP TKTQLLIVMS WLLPAIIFGI MIYGWQAMTG QSTSMSGAEC 180
  181 SAPFLSNPYV NMGMYVAYYW TTLVAMLILY KGIHQAAKNL EKKAKAKERR HIALILSQRL 240
  241 GTQVGVSLML QSKAEKEKAE EAQKDSGYTS NQAGGSLNTE NDQNLGVIEE ERSGFLSRRE 300
  301 SNESYYPGPH PTAANSRRCS EMEKVSLLSE SDGVPSTRPA KSYGRLSLRS RYSASESITT 360
  361 THENDEKEVE KADSLQKLFA DDELGSVLNF KEEKLKNTDS NNDSDTTSVI LQRSRKYKKN 420
  421 KRPRSSRRSE HSTPRQIAKV KQAEGTAAQL IEESVPDDDQ TETIEVKRTD RWVVSMKKRI 480
  481 ARALIRRRST TRPERGSSSN SEKISTISTV ITREKVISSI FAPIAVFNRG RKQTKAEKRA 540
  541 HKAFRTITFI VGFFAILWSP YYIMATVYGF CKGECIPSFL YTLSYYMCYL NSSGNPFAYA 600
  601 LANRQFRSAF MRMFRGNFNK VA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-2 hcp2 ip from december Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..280] PSI-BLAST 32.522879 Rhodopsin
    2 View Details [281..453] deduced N/A No confident structure predictions are available.
    3 View Details [454..622] FFAS03 4.1 Rhodopsin


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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