YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: avr-14

General Information:
Name(s) found: avr-14 / CE30227 [WormBase]
Description(s) found:
Found 18 descriptions.
SHOW ALL
  • WBGene00000232 locus:avr-14 status:Confirmed UniProt:Q95Q96 protein_id:CCD61323.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 416 amino acids

    Gene Ontology:
    Cellular Component: postsynaptic membrane [IEALink to PubMed article]
    membrane [IDALink to PubMed article][IEALink to PubMed article]
    integral to membrane [IEALink to PubMed article]
    Biological Process: ion transport [IDALink to PubMed article][IEALink to PubMed article]
    locomotion involved in locomotory behavior [IGILink to PubMed article][IMPLink to PubMed article]
    regulation of pharyngeal pumping [IGILink to PubMed article][IMPLink to PubMed article]
    response to drug [IGILink to PubMed article]
    transport [IEALink to PubMed article]
    Molecular Function: drug binding [IGILink to PubMed article]
    neurotransmitter receptor activity [IEALink to PubMed article]
    extracellular ligand-gated ion channel activity [IEALink to PubMed article]
    extracellular-glutamate-gated chloride channel activity [IDALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWHYRLTTIL LIISIIHSIR AKRKLKEQEI IQRILKDYDW RVRPRGMNAT WPDTGGPVLV  60
   61 TVNIYLRSIS KIDDVNMEYS AQFTFREEWT DQRLAYERYE ESGDTEVPPF VVLATSENAD 120
  121 QSQQIWMPDT FFQNEKEARR HLIDKPNVLI RIHKNGQILY SVRLSLVLSC PMSLEFYPLD 180
  181 RQNCLIDLAS YAYTTQDIKY EWKEKKPIQQ KDGLRQSLPS FELQDVVTDY CTSLTNTGEY 240
  241 SCLRTRMVLR REFSYYLLQL YIPSFMLVIV SWVSFWLDKD SVPARVTLGV TTLLTMTTQS 300
  301 SGINAKLPPV SYTKAIDVWI GVCLAFIFGA LLEFALVNYA ARKDMTQVSQ RIRQMKQLPT 360
  361 EGYRPLSASQ GRSSFCCRIF VRRYKERSKR IDVVSRLVFP IGYACFNVLY WAVYLM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..341] PSI-BLAST 63.69897 Refined structure of the nicotinic acetylcholine receptor at 4A resolution.
    2 View Details [342..416] MSA 1.466996 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle