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Protein Overview: snt-5

General Information:
Name(s) found: snt-5 / CE29448 [WormBase]
Description(s) found:
Found 17 descriptions.
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  • WBGene00004925 locus:snt-5 status:Confirmed UniProt:O16700 protein_id:CCD68891.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 458 amino acids

    Gene Ontology:
    Cellular Component: synaptic vesicle [IEALink to PubMed article]
    membrane [IEALink to PubMed article]
    integral to membrane [IEALink to PubMed article]
    Biological Process: transport [IEALink to PubMed article]
    Molecular Function: transporter activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDEWWWWVLV AILSLCAVIL SSCALYFGAR ICVRQIKRKV KYSEVPTSVP EIKVSVPQSA  60
   61 STLSISKMNG SYRARVLSRN GCSPPWMDRN FETSTRSSPC TSPAIASTSD SCELLGDDPR 120
  121 SASSMRNSMF LFNVDGNPEV IDEMEDIDER SVMHYELGFY DKTDGGCIRG TLTFALRYDF 180
  181 IHRVLMLHVI RANNLPVEDK GVTVDPYVKM YLLPERRGHC KTRICKKTND PEFNEMFSFD 240
  241 VSFNNLANRM LQFTVYDFDR FTRHGLIGNI IMRDLFEKSD LYTWTEYTMH IVASQNKNDY 300
  301 GDLLLFLTYS NQEEKLYINV SKAYNLRPMD ITGASDPYVK IEQTFNGKRF KSKKSSTKRA 360
  361 NLNPVFHETL VFDIPSSQIA ETNILIQVMD WDRIGKDDLL GCCILGKDSP TADGKTQWDN 420
  421 CLNAVPEEGQ LKNKPVGQWH SLLSEVPEAF KNMPKAKK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..121] MSA 2.316993 View MSA. No confident structure predictions are available.
    2 View Details [122..458] PSI-BLAST 77.522879 Synaptogamin I


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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