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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: snt-5
Protein type: Globular with Signal Peptide
Type Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDEWWWWVLV AILSLCAVIL SSCALYFGAR ICVRQIKRKV KYSEVPTSVP EIKVSVPQSA  60
   61 STLSISKMNG SYRARVLSRN GCSPPWMDRN FETSTRSSPC TSPAIASTSD SCELLGDDPR 120
  121 SASSMRNSMF LFNVDGNPEV IDEMEDIDER SVMHYELGFY DKTDGGCIRG TLTFALRYDF 180
  181 IHRVLMLHVI RANNLPVEDK GVTVDPYVKM YLLPERRGHC KTRICKKTND PEFNEMFSFD 240
  241 VSFNNLANRM LQFTVYDFDR FTRHGLIGNI IMRDLFEKSD LYTWTEYTMH IVASQNKNDY 300
  301 GDLLLFLTYS NQEEKLYINV SKAYNLRPMD ITGASDPYVK IEQTFNGKRF KSKKSSTKRA 360
  361 NLNPVFHETL VFDIPSSQIA ETNILIQVMD WDRIGKDDLL GCCILGKDSP TADGKTQWDN 420
  421 CLNAVPEEGQ LKNKPVGQWH SLLSEVPEAF KNMPKAKK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle