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Protein Overview: CE29439

General Information:
Name(s) found: CE29439 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00019833 status:Confirmed UniProt:Q21650 protein_id:CCD68398.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 431 amino acids

    Gene Ontology:
    Cellular Component: extracellular region [IEALink to PubMed article]
    Biological Process: chitin metabolic process [IEALink to PubMed article]
    Molecular Function: chitin binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLLPCLTTL LLTISTVNSK FVTDCTNVGD GMYPLGACEP RFLACVSGEA RYMDCPEDLV  60
   61 YHKNLEFCDW RHNVFECGEE GEENEFSGDG SGESSGDEEI TFGDSSGESS GDELLENVCE 120
  121 SLKDGVYSSG TCSSSYIICN SGSPRFLSCS TPLIYDPTNK KCSWKGMIDE CSQVSGEYCE 180
  181 SDGNISKSEC SNVFFSCSEG IAHRRNCPAN LVFNPAISSC DWPKNVMDCS EKSEKPQNCG 240
  241 EVDGYFSFGR CSSSFSACTN GIPIVMFCPD GLMFSEKNQM CDYEWNVDEC DLESSGFMEN 300
  301 YKASEALTPC TNMDNGLYAL DCTPRVLSCQ NGRENIFECP PSLVFNENSL ICDYPETSLK 360
  361 CCMEDALLIR DASIGTYDCS IDGLFSSTLC SRNYHKCSNG QLIPHECADS NAVFSASAAK 420
  421 CVDSSLLEQC Q

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..76] PSI-BLAST 3.69897 No description for 2dtgE was found.
    2 View Details [77..310] PSI-BLAST 3.69897 Hybrid domain of integrin beta; Integrin beta A domain; Integrin beta tail domain; Integrin beta EGF-like domains
    3 View Details [311..372] FFAS03 2.22 Tachycitin
    4 View Details [373..431] Pfam 9.161151 No description for PF01607.15 was found. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • binding
    		•  0.461387356230357 bayes_pls_golite062009
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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