| Protein: | CE29439 |
| Organism: | Caenorhabditis elegans |
| Length: | 431 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE29439.
| Description | E-value | Query Range |
Subject Range |
|
|
173.0 | [0..13] | [430..302] |
|
Region A: Residues: [1-76] |
1 11 21 31 41 51
| | | | | |
1 MRLLPCLTTL LLTISTVNSK FVTDCTNVGD GMYPLGACEP RFLACVSGEA RYMDCPEDLV 60
61 YHKNLEFCDW RHNVFE
|
| Detection Method: |  |
| Confidence: | 3.69897 |
| Match: | 2dtgE |
| Description: | No description for 2dtgE was found. |
|
Region A: Residues: [77-310] |
1 11 21 31 41 51
| | | | | |
1 CGEEGEENEF SGDGSGESSG DEEITFGDSS GESSGDELLE NVCESLKDGV YSSGTCSSSY 60
61 IICNSGSPRF LSCSTPLIYD PTNKKCSWKG MIDECSQVSG EYCESDGNIS KSECSNVFFS 120
121 CSEGIAHRRN CPANLVFNPA ISSCDWPKNV MDCSEKSEKP QNCGEVDGYF SFGRCSSSFS 180
181 ACTNGIPIVM FCPDGLMFSE KNQMCDYEWN VDECDLESSG FMENYKASEA LTPC
|
| Detection Method: | |
| Confidence: | 3.69897 |
| Match: | 1jv2B |
| Description: | Hybrid domain of integrin beta; Integrin beta A domain; Integrin beta tail domain; Integrin beta EGF-like domains |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [311-372] |
1 11 21 31 41 51
| | | | | |
1 TNMDNGLYAL DCTPRVLSCQ NGRENIFECP PSLVFNENSL ICDYPETSLK CCMEDALLIR 60
61 DA
|
| Detection Method: | |
| Confidence: | 2.22 |
| Match: | 1dqcA |
| Description: | Tachycitin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.461387356230357 | bayes_pls_golite062009 |
|
Region A: Residues: [373-431] |
1 11 21 31 41 51
| | | | | |
1 SIGTYDCSID GLFSSTLCSR NYHKCSNGQL IPHECADSNA VFSASAAKCV DSSLLEQCQ
|
| Detection Method: | |
| Confidence: | 9.161151 |
| Match: | PF01607.15 |
| Description: | No description for PF01607.15 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
