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Protein Overview: hrp-1

General Information:
Name(s) found: hrp-1 / CE29317 [WormBase]
Description(s) found:
Found 16 descriptions.
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  • WBGene00001999 locus:hrp-1 Heterogeneous nuclear ribonucleoprotein A1 status:Confirmed UniProt:Q22037 protein_id:CCD71136.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 308 amino acids

    Gene Ontology:
    Cellular Component: chromosome, telomeric region [IDALink to PubMed article]
    Biological Process: nematode larval development [IMPLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed articleLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed article]
    growth [IMPLink to PubMed article]
    Molecular Function: nucleic acid binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MREFYSQFGE ITDIIVMRDP TTKRSRGFGF VTFSGKTEVD AAMKQRPHII DGKTVDPKRA  60
   61 VPRDDKNRSE SNVSTKRLYV SGVREDHTED MLTEYFTKYG TVTKSEIILD KATQKPRGFG 120
  121 FVTFDDHDSV DQCVLQKSHM VNGHRCDVRK GLSKDEMSKA QMNRDRETRG GRSRDGQRGG 180
  181 YNGGGGGGGG WGGPAQRGGP GAYGGPGGGG QGGYGGDYGG GWGQQGGGGQ GGWGGPQQQQ 240
  241 GGGGWGQQGG GGQGGWGGPQ QQQQGGWGGP QQGGGGGGWG GQGQQQGGWG GQSGAQQWAH 300
  301 AQGGNRNY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..156] PSI-BLAST 41.69897 Crystal Structure of UP1 Complexed With d(TTAGGGTTAG(6-MI)G); A Human Telomeric Repeat Containing 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine (6-MI)
    2 View Details [157..308] PSI-BLAST 4.221849 Sec24

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.950788308762215 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.29562225149076 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle