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Protein Overview: mig-10

General Information:
Name(s) found: mig-10 / CE29261 [WormBase]
Description(s) found:
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  • WBGene00003243 locus:mig-10 Abnormal cell migration protein 10 status:Confirmed UniProt:P34400 protein_id:CCD69132.1 [WormBase]
  • gi|71984357|ref|NP_498822.2| abnormal cell MIGration family member (mig-10) [Caenorhabditis elegans] [NCBI NR]
  • sp|P34400|MI10_CAEEL Abnormal cell migration protein 10 [NCBI NR]
  • ref|NP_498821.1| abnormal cell MIGration MIG-10, amyloid beta protein-binding family B member 1 interacting protein like (75.0 kD) (mig-10) [Caenorhabditis elegans] [NCBI NR]
  • gi|15617779|gb|AAK84523.2|L10986_9 Abnormal cell migration protein 10, isoform a [Caenorhabditis elegans] [NCBI NR]
  • (P34400) Abnormal cell migration protein 10 [Swiss-Prot]
  • [wormpep67.fasta]
  • CE29261 WBGene00003243 locus:mig-10 status:Confirmed SW:P34400 protein_id:AAK84523.2 [wormpep150.fasta]
  • 29261 WBGene00003243 locus:mig-10 status:Confirmed SW:P34400 protein_id:AAK84523.2 [wormpep130-phg-ecoli-orf-rand.fasta]
  • abnormal cell MIGration MIG-10, amyloid beta protein-binding family B member 1 interacting protein like (75.0 kD) (mig-10) [Caenorhabditis elegans]gi|15617779|gb|AAK84523.2| Abnormal cell migration protein 10, isoform a [Caenorhabditis elegans]gi|382589 [nrdb_11152004_Chlamydomonas]
  • locus:mig-10 status:Confirmed SW:P34400 protein_id:AAA28018.1 [wormpep115.fasta.reversed]
  • CE29261 locus:mig-10 status:Confirmed [wormpep80.hongbin]
  • CE29261 WBGene00003243 locus:mig-10 status:Confirmed UniProt:P34400 protein_id:AAK84523.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE29261 WBGene00003243 locus:mig-10 status:Confirmed UniProt:P34400 protein_id:AAK84523.2| [wormORF-contam.fasta]
  • abnormal cell MIGration family member (mig-10) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Abnormal cell migration protein 10, isoform a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE29261 WBGene00003243 locus:mig-10 status:Confirmed UniProt:P34400 protein_id:CCD69132.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE29261 WBGene00003243 locus:mig-10 status:Confirmed UniProt:P34400 protein_id:CCD69132.1 Abnormal cell migration protein 10 [wormpep246-ecoli-contam.fasta]
  • Isoform of P34400, Isoform a of Abnormal cell migration protein 10 OS=Caenorhabditis elegans GN=mig-10 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 667 amino acids

    Gene Ontology:
    Cellular Component: filamentous actin [IDALink to PubMed article]
    Biological Process: tail morphogenesis [IMPLink to PubMed article]
    vulval development [IMPLink to PubMed article]
    neuron migration [IMPLink to PubMed article]
    locomotory behavior [IMPLink to PubMed article]
    mesodermal cell migration [IMPLink to PubMed article]
    locomotion [IMPLink to PubMed article]
    signal transduction [IEALink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed article]
    oviposition [IMPLink to PubMed articleLink to PubMed article]
    regulation of cell migration [IMPLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTYDFPDPY PVQIRARPQV PPKPPIDTVR YSMNNIKESA DWQLDELLEE LEALETQLNS  60
   61 SNGGDQLLLG VSGIPASSSR ENVKSISTLP PPPPALSYHQ TPQQPQLLHH HNNHLGYQNG 120
  121 IHQITSINSA ASSCSSPDGD SAFGDSSSTE SSNNRCRNSA FSSNDSCRDS LNTPSPTQVS 180
  181 PRNGELNAEE AKAQKIRQAL EKMKEAKVTK IFVKFFVEDG EALQLLIDER WTVADTLKQL 240
  241 AEKNHIALME DHCIVEEYPE LYIKRVYEDH EKVVENIQMW VQDSPNKLYF MRRPDKYAFI 300
  301 SRPELYLLTP KTSDHMEIPS GDQWTIDVKQ KFVSEYFHRE PVVPPEMEGF LYLKSDGRKS 360
  361 WKKHYFVLRP SGLYYAPKSK KPTTKDLTCL MNLHSNQVYT GIGWEKKYKS PTPWCISIKL 420
  421 TALQMKRSQF IKYICAEDEM TFKKWLVALR IAKNGAELLE NYERACQIRR ETLGPASSMS 480
  481 AASSSTAISE VPHSLSHHQR TPSVASSIQL SSHMMNNPTH PLSVNVRNQS PASFSVNSCQ 540
  541 QSHPSRTSAK LEIQYDEQPT GTIKRAPLDV LRRVSRASTS SPTIPQEESD SDEEFPAPPP 600
  601 VASVMRMPPP VTPPKPCTPL TSKKAPPPPP KRSDTTKLQS ASPMAPAKND LEAALARRRE 660
  661 KMATMEC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..180] MSA 2.04298 View MSA. No confident structure predictions are available.
    2 View Details [181..335] PSI-BLAST 34.30103 Solution Structure of the RA Domain of Human Grb7 Protein
    3 View Details [336..453] PSI-BLAST 14.39794 Grp1
    4 View Details [454..532] deduced N/A No confident structure predictions are available.
    5 View Details [533..667] FFAS03 1.18 No description for 2j63A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  1.44703207958213 bayes_pls_golite062009
  • protein binding
    		•  1.14993629560865 bayes_pls_golite062009
    3
    Term Confidence Notes
  • binding
    		•  1.95118342902889 bayes_pls_golite062009
  • protein binding
    		•  1.40320448019588 bayes_pls_golite062009
    4 No functions predicted.
    5 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle