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Protein Overview: pnk-1

General Information:
Name(s) found: pnk-1 / CE29080 [WormBase]
Description(s) found:
Found 17 descriptions.
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  • WBGene00004068 locus:pnk-1 status:Confirmed UniProt:H2KYP7 protein_id:CCD64181.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 449 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: nematode larval development [IMPLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed articleLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed article]
    coenzyme A biosynthetic process [IEALink to PubMed article]
    reproduction [IMPLink to PubMed article]
    growth [IMPLink to PubMed article]
    Molecular Function: ATP binding [IEALink to PubMed article]
    pantothenate kinase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGHTSVTSSR RISPRGSPPN LRRTPPKIRK VLVLREKRAA ATEDQIMDDL LLSSKLKRVD  60
   61 SATGSVSPRV CAADALPTTT PAASTALRQT QKAPKTPYVI LPASDTFEKF RKTSRVSVDI 120
  121 GGTLIKVVYS SVMDEELPEE SLNGHTRKYA YEDGKRVLVN FKKFTDMDRF INFLKEVWTD 180
  181 RKRGDVIHCT GGGSYKYSEI IMKELGVRLQ RTDEMRSLIF GVNFLLSTNV DESFTYHHDA 240
  241 IGRNKFQYRP IAADLIYPFL LVNIGTGISI LKVDSPTSYE RVGGSSMGGG TFMGLGSLLT 300
  301 PAQNFDELLE MANRGDHRNV DKLVCDIYGG AYDELGLKAD LIAGSMAKCN RFEETTKKQQ 360
  361 HKPEDIAKSL LLMVSNNIGQ MAYLYGTRYN LKRIYFGGYF IRQDPITMRT LSFAINYWSK 420
  421 GEIEALYLKH EGYLGAMGSF LDEDGKLDD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..107] deduced N/A No confident structure predictions are available.
    2 View Details [108..449] PSI-BLAST 128.0 No description for 2i7nA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • structural constituent of cytoskeleton
    		•  2.46121037473545 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  2.20983242331685 bayes_pls_golite062009
  • binding
    		•  1.92007657015464 bayes_pls_golite062009
  • pantothenate kinase activity
    		•  1.12808997366738 bayes_pls_golite062009
  • actin binding
    		•  1.03829083423378 bayes_pls_golite062009
  • structural molecule activity
    		•  0.963253603902027 bayes_pls_golite062009
  • hydrolase activity
    		•  0.921698825968978 bayes_pls_golite062009
  • protein binding
    		•  0.856838411407636 bayes_pls_golite062009
  • kinase activity
    		•  0.436497417645497 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  0.342031925172053 bayes_pls_golite062009
  • carbohydrate kinase activity
    		•  0.322729811262666 bayes_pls_golite062009
  • myosin binding
    		•  0.31501932970343 bayes_pls_golite062009
  • catalytic activity
    		•  0.296484721581333 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.267232202923286 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.145473164813666 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.101675282305395 bayes_pls_golite062009
  • unfolded protein binding
    		•  0.0304569608189402 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.79

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle