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Protein Overview: cit-1.2

General Information:
Name(s) found: cit-1.2 / CE29042 [WormBase]
Description(s) found:
Found 20 descriptions.
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  • WBGene00000508 locus:cit-1.2 Cyclin-T1.2 status:Partially_confirmed UniProt:P34424 protein_id:CCD63443.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 555 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: regulation of transcription [IEALink to PubMed article]
    regulation of cyclin-dependent protein kinase activity [IEALink to PubMed article]
    Molecular Function: protein kinase binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNSNKLIAE KNGSRYGRMI HPWLRKKQDM LADTPSRREG MTYEEELSKR QQGGVFIFDI  60
   61 AMQLTHGKGE HGLSGVAATL FNRFFNVHSL KRCDFRDVAA ACVFLAGKNE DAPKKLKYVV 120
  121 TQLWQFKYPH NKQFQSEQHF LDQCNVVTLI EDVLLKTISF DINVDLPHQY VLKLMRDVEK 180
  181 GRNVYKDMVK TAYYMATDVL IITDWSVRYS CASIATACVN IAAFFHNINM DDIVPFELSD 240
  241 RWYRLEDQSM TREEVEAMTK EFLDIFSRNP QFHIGSLKKI DPLGKVKIVG MPPQVSSTVT 300
  301 PSGSSSNLKK IDLESYKGRP KPLSNSSDSP STRPSFLPDV KNQKVVEQEL MEQRMKEAAQ 360
  361 QKIHRNGHRP SSSSHPLHHH STSSSASNNS NHQNRSSSGL SAHQHQKPYN EDSRSAKRSM 420
  421 MYEETNSSKK PRIDYKMSFV ASSSTTIATM HNDHFSQTTH QQNISTYARG VNEMMLNQVA 480
  481 PPPLMSVSAQ PSTYQKMCME YQRNPADSRH TMSSTQQISP PDEPSPPVSQ ILLPPPPPPP 540
  541 ILPPRLDEME EGELV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..310] PSI-BLAST 55.69897 No description for 2i53A was found.
    2 View Details [311..365] deduced N/A No confident structure predictions are available.
    3 View Details [366..555] MSA 5.163996 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.882381275214425 bayes_pls_golite062009
  • protein binding
    		•  0.65276271768935 bayes_pls_golite062009
  • kinase regulator activity
    		•  0.14915355683092 bayes_pls_golite062009
  • protein kinase regulator activity
    		•  0.13161125048906 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle