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Protein Overview: tag-143

General Information:
Name(s) found: tag-143 / CE29017 [WormBase]
Description(s) found:
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  • WBGene00006489 locus:zhit-3 status:Confirmed UniProt:Q23644 protein_id:CAA94857.2 [WormBase]
  • gi|17566936|ref|NP_505627.1| Temporarily Assigned Gene name family member (tag-143) [Caenorhabditis elegans] [NCBI NR]
  • gi|15718302|emb|CAA94857.2| C. elegans protein ZK856.9, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE29017 WBGene00006489 locus:tag-143 status:Confirmed TR:Q23644 protein_id:CAA94857.2 [wormpep150.fasta]
  • 29017 WBGene00014110 status:Confirmed TR:Q23644 protein_id:CAA94857.2 [wormpep130-phg-ecoli-orf-rand.fasta]
  • serologically defined breast cancer antigen like (51.4 kD) (5K692) [Caenorhabditis elegans]gi|15718302|emb|CAA94857.2| Hypothetical protein ZK856.9 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • CE29017 WBGene00014110 status:Confirmed TR:Q23644 protein_id:CAA94857.2 [wormpep132.fasta]
  • 29017 WBGene00006489 locus:tag-143 status:Confirmed TR:Q23644 protein_id:CAA94857.2 [wormpep150-phg-orf-ecoli-rand.fasta]
  • status:Confirmed TR:Q23644 protein_id:CAA94857.2 [wormpep115.fasta.reversed]
  • CE29017 status:Confirmed TR:Q23644 protein_id:CAA94857.2 [wormpep80.hongbin]
  • CE29017 WBGene00006489 locus:tag-143 status:Confirmed UniProt:Q23644_CAEEL protein_id:CAA94857.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE29017 WBGene00006489 locus:tag-143 status:Confirmed UniProt:Q23644_CAEEL protein_id:CAA94857.2| [wormORF-contam.fasta]
  • Hypothetical protein ZK856.9 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Temporarily Assigned Gene name family member (tag-143) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE29017 WBGene00006489 locus:tag-143 status:Confirmed UniProt:Q23644 protein_id:CAA94857.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • CE29017 WBGene00006489 locus:zhit-3 status:Confirmed UniProt:Q23644 protein_id:CAA94857.2 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Zinc finger, HIT-type OS=Caenorhabditis elegans GN=zhit-3 PE=1 SV=2 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 455 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTSHTPEPK EVEDYQEDGE ILDDDDDVPT EIPNITSEFL VNYPSSEDEK SPEDVIKAYK  60
   61 RKIENQKNVE NEESVIPAID PKLCKVCLKN EHKYKCPRCE MRTCSLDCSK KHKADNNCDG 120
  121 VRQAFTKVDK LSQYDPQKSI DDQKFMHLMK EKVGLGAEPV GGVGNDVNSS DGEEKPVDPN 180
  181 ALRYTTNSPT ERYLLNAARF RHIWLGFVGE QENESRHEQH SDTIFWTLKL SFKKQTADGG 240
  241 IEVFEKIVNN IPETIRVATV LKQFFKPRQY GCIVSESDLD VEKLKPFIDR GIDDVNVYME 300
  301 VHANPERYYG IITDSTILEM TRTRVVADFP KLVITMKDEF IESMQLLSME ELAEIQTKYG 360
  361 GVGNQRFGGG GRGRGGRGFH RGGANRGGGG SNHNIFRKRP GQDGGQDGGF KRGRGGNFHG 420
  421 GSRRGGYQNR THQNIDTFDP FEPFSGPNRL PMEYN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..160] PSI-BLAST 12.39794 Solution structure of zinc finger HIT domain in protein FON
    2 View Details [161..358] MSA 4.095987 View MSA. No confident structure predictions are available.
    3 View Details [359..455] FFAS03 1.24 Thermus thermophilus Leucyl-tRNA synthetase complexed with with a tRNAleu transcript in the post-editing conformation and a post- transfer editing subsrate analogue


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle