| Protein: | tag-143 |
| Organism: | Caenorhabditis elegans |
| Length: | 455 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tag-143.
| Description | E-value | Query Range |
Subject Range |
|
|
383.0 | [0..1] | [453..1] |
|
Region A: Residues: [1-160] |
1 11 21 31 41 51
| | | | | |
1 MTTSHTPEPK EVEDYQEDGE ILDDDDDVPT EIPNITSEFL VNYPSSEDEK SPEDVIKAYK 60
61 RKIENQKNVE NEESVIPAID PKLCKVCLKN EHKYKCPRCE MRTCSLDCSK KHKADNNCDG 120
121 VRQAFTKVDK LSQYDPQKSI DDQKFMHLMK EKVGLGAEPV
|
| Detection Method: |  |
| Confidence: | 12.39794 |
| Match: | 1x4sA |
| Description: | Solution structure of zinc finger HIT domain in protein FON |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [161-358] |
1 11 21 31 41 51
| | | | | |
1 GGVGNDVNSS DGEEKPVDPN ALRYTTNSPT ERYLLNAARF RHIWLGFVGE QENESRHEQH 60
61 SDTIFWTLKL SFKKQTADGG IEVFEKIVNN IPETIRVATV LKQFFKPRQY GCIVSESDLD 120
121 VEKLKPFIDR GIDDVNVYME VHANPERYYG IITDSTILEM TRTRVVADFP KLVITMKDEF 180
181 IESMQLLSME ELAEIQTK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [359-455] |
1 11 21 31 41 51
| | | | | |
1 YGGVGNQRFG GGGRGRGGRG FHRGGANRGG GGSNHNIFRK RPGQDGGQDG GFKRGRGGNF 60
61 HGGSRRGGYQ NRTHQNIDTF DPFEPFSGPN RLPMEYN
|
| Detection Method: | |
| Confidence: | 1.24 |
| Match: | 2bteB |
| Description: | Thermus thermophilus Leucyl-tRNA synthetase complexed with with a tRNAleu transcript in the post-editing conformation and a post- transfer editing subsrate analogue |
Matching Structure (courtesy of the PDB): |
|
