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Protein Overview: CE28981

General Information:
Name(s) found: CE28981 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00021476 status:Confirmed UniProt:Q95XR2 protein_id:CCD69919.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 465 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: rRNA processing [IEALink to PubMed article]
    Molecular Function: rRNA methyltransferase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSCLRQSSQS FYFTQIRWKT VKFKTKIAKT KPLKTPSAQA LDHFDFYYGP LFGKKWPSIR  60
   61 LGLLSPNRYL AVMNTMSRNW QAHDEILSDM GAKDLLASIR GKAEDQAIET KRKSVEEKAN 120
  121 RETQKVKHEI SNPSTSTNTE DSEPDEAIFR SAAGLGEFRA SAGELSSGSL QMGLGQSNQN 180
  181 KNVEITGFEG EGVRIPKRDH FFYYPQALHV RSFDRAVLLD FPAPMKDEVG VPSYWLLDGG 240
  241 SLLPVLALGL QKDDSLLDMC AAPGGKSLLA ALSNLPSKIV CNDFKLARLG QLKRALMTYV 300
  301 PEDSETIDKF VLKRKDASDV KTWDEFEAYD KVLVDVPCST DRLSVSTDDG NLFSTGSTQQ 360
  361 RLDLPVLQTK ILVNALRSVK VGGSVVYSTC TLSPSQNEAV VENAVAVVRN DFGIVTVEES 420
  421 LHQLVSHMTS SGLYRFHDTP LGALVVPFLP SNFGPMYICK LTRLQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..465] PSI-BLAST 62.045757 The crystal structure of E. coli Fmu binary complex with S-Adenosylmethionine at 2.1 A resolution

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.723277178398499 bayes_pls_golite062009
  • transferase activity
    		•  0.64512166557639 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  0.54403439349476 bayes_pls_golite062009
  • methyltransferase activity
    		•  0.54389223881989 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.12965224171975 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.83

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle