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Protein Overview: CE28826

General Information:
Name(s) found: CE28826 [WormBase]
Description(s) found:
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  • WBGene00017886 status:Confirmed UniProt:H2KZU5 protein_id:CCD69823.1 [WormBase]
  • gi|17506947|ref|NP_491478.1| hypothetical protein F28B3.5 [Caenorhabditis elegans] [NCBI NR]
  • gi|15277384|gb|AAK93851.1|AF003136_6 Hypothetical protein F28B3.5a [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE28826 WBGene00017886 status:Partially_confirmed TR:O01783 protein_id:AAK93851.1 [wormpep150.fasta]
  • 28826 WBGene00017886 status:Partially_confirmed TR:O01783 protein_id:AAK93851.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • putative endoplasmic reticulum protein family member, with at least 7 transmembrane domains, of ancient origin (53.1 kD) (1F495) [Caenorhabditis elegans]gi|15277384|gb|AAK93851.1| Hypothetical protein F28B3.5a [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • status:Partially_confirmed TR:O01783 protein_id:AAK93851.1 [wormpep115.fasta.reversed]
  • CE28826 status:Partially_confirmed TR:O01783 protein_id:AAK93851.1 [wormpep80.hongbin]
  • CE28826 WBGene00017886 status:Partially_confirmed UniProt:O01783_CAEEL protein_id:AAK93851.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE28826 WBGene00017886 status:Partially_confirmed UniProt:O01783_CAEEL protein_id:AAK93851.1| [wormORF-contam.fasta]
  • F28B3.5a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein F28B3.5a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE28826 WBGene00017886 status:Confirmed UniProt:O01783 protein_id:AAK93851.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE28826 WBGene00017886 status:Confirmed UniProt:H2KZU5 protein_id:CCD69823.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Uncharacterized protein OS=Caenorhabditis elegans GN=CELE_F28B3.5 PE=4 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 468 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    Biological Process: sodium ion transport [IEALink to PubMed article]
    determination of adult lifespan [IMPLink to PubMed article]
    Molecular Function: transporter activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSSLLSIGL SQFGLSVLQT LFMFYYVKVY INQFHVNTKW FNIAQTLFMV WNAINDPLFG  60
   61 YLQEIRGSWL TNRLLVIKTL SPFLVGSFVF MWIPWNTEGS DLEGLHLVLS LFLYDAFFSA 120
  121 ISVAWGALFA DTTQNQSLIR VKALKYSQIA ILLSVFSIAV TEKLSNSLKN FPIFQGICFF 180
  181 VAILSFICLW WGGHFGKITN NRQEDKEQGD REVLIEKEQE KEKEHQLTFH ENVQNSIHLT 240
  241 KQILSQRQFL AIVITNFFHT ARSIAHMNFA SIITEILIPQ DILPSGSIRL SLFFMLLTLG 300
  301 PQIILIVNEK LIANAGAIRV ISVSYIVSFL SGFMIVASGN PYSIMLFMLI DCVTVHTIAP 360
  361 LFNIIISDFV DDDARKNSRS SGIPSIVFSL NALFVKPAQS VAPVIIVHLL NQSGYQDYLK 420
  421 SKVLSEDLKN TILLILFMTP VIIGGIQYAV MKSMFSFRKQ NIRTTHVI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..468] PSI-BLAST 26.69897 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.557257328314518 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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