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Protein Overview: CE28711

General Information:
Name(s) found: CE28711 [WormBase]
Description(s) found:
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  • WBGene00013186 status:Partially_confirmed UniProt:G5EFP0 protein_id:CAB55065.2 [WormBase]
  • gi|17510267|ref|NP_492916.1| hypothetical protein Y53H1C.3 [Caenorhabditis elegans] [NCBI NR]
  • gi|15718337|emb|CAB55065.2| C. elegans protein Y53H1C.3, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|15718165|emb|CAC70076.1| C. elegans protein Y53H1C.3, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE28711 WBGene00013186 status:Predicted TR:Q9NA89 protein_id:CAB55065.2 [wormpep150.fasta]
  • 28711 WBGene00013186 status:Predicted TR:Q9NA89 protein_id:CAB55065.2 [wormpep130-phg-ecoli-orf-rand.fasta]
  • predicted CDS, putative protein family member, with 3 coiled coil-4 domains (1M9) [Caenorhabditis elegans]gi|15718165|emb|CAC70076.1| Hypothetical protein Y53H1C.3 [Caenorhabditis elegans]gi|15718337|emb|CAB55065.2| Hypothetical protein Y53H1C.3 [Caenor [nrdb_11152004_Chlamydomonas]
  • status:Predicted TR:Q9NA89 protein_id:CAB55065.2 [wormpep115.fasta.reversed]
  • CE28711 status:Predicted TR:Q9NA89 protein_id:CAB55065.2 [wormpep80.hongbin]
  • CE28711 WBGene00013186 status:Predicted UniProt:Q9NA89_CAEEL protein_id:CAC70076.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE28711 WBGene00013186 status:Predicted UniProt:Q9NA89_CAEEL protein_id:CAC70076.1| [wormORF-contam.fasta]
  • Hypothetical protein Y53H1C.3 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Y53H1C.3 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE28711 WBGene00013186 status:Partially_confirmed UniProt:Q9NA89 protein_id:CAC70076.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • CE28711 WBGene00013186 status:Partially_confirmed UniProt:G5EFP0 protein_id:CAB55065.2 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Uncharacterized protein OS=Caenorhabditis elegans GN=CELE_Y53H1C.3 PE=4 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 739 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: collagen and cuticulin-based cuticle development [IMP]
    hermaphrodite genitalia development [IMP]
    morphogenesis of an epithelium [IMP]
    nematode larval development [IMP]
    locomotion [IMP]
    growth [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISQILNAMS IQKGLISGTL DPETLISELL GSALPSELAS INMLHVQQGI EIGLNIPKLL  60
   61 RDAAGDENAK ARKAYEGYNA ILKEIDGMID VKNWSGKADF DKGIAELRKD YVKPKVLENL 120
  121 EKICQNLTSI LNSATLEADQ LSTALEALTS LSTSFNATSD IWMFHEYTST IQAVAPFLKT 180
  181 ARGVEEHLKY KDNLNLTKKE EAAFNKYISI YTNSAVHMFL DLGPLIGKIF APEGHNKSLS 240
  241 LPEFDKVLSD AWIRSVVNSD SLGKGLSRLS AFQSSLLRAQ RRLNFTDVAG GVRSIIEMFN 300
  301 FDVFPGDDHM SAADQECTPL ELRFRAISDL KMFIDEIEVE FNNLTMLAIK LSFFLSGNSD 360
  361 AGQDFLKIHR EHETVVIKKL NETGQLKSLK AHLSMINQQL ELINTFPIHD INVYARYAQL 420
  421 DIGWIYSQHK DELEKYADYF NCLQNNAYLK YKASLSIATK RISDHVYNST YQNSFNNLLG 480
  481 VFKNSTSAVD DMFVMKRHMK AMKNFHTVET DALGEFKDVE SYAENLRLAV QGLEKLSDLV 540
  541 EKKDQLKYVI DNINVLIESV SVMDDVPHLY NLQKIVLLKS EFRMLHLSLE GFEEQATDSI 600
  601 ESIVLEDYEQ LFVQARSIPS IEGDFEAIGN SVGELARLVT NVTVKEILRN VNVSLNSLDL 660
  661 DFTSYRVHFA NVALRELDVF FANFSKKFEK PEELDVRVEQ KERRKAKNPN ERERLDRIPW 720
  721 WFVFGCVTSI LFGALFALA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..185] PSI-BLAST 3.154902 No description for 2dfsA was found.
    2 View Details [186..272] deduced N/A No confident structure predictions are available.
    3 View Details [273..638] PSI-BLAST 8.154902 Heavy meromyosin subfragment
    4 View Details [639..739] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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