YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CE28526

General Information:
Name(s) found: CE28526 [WormBase]
Description(s) found:
SHOW ONLY BEST
  • WBGene00007138 Uncharacterized transporter B0285.6 status:Partially_confirmed UniProt:P46556 protein_id:CAA84299.2 [WormBase]
  • gi|21431899|sp|P46556.2|YKG6_CAEEL RecName: Full=Uncharacterized transporter B0285.6 [NCBI NR]
  • gi|17551790|ref|NP_497877.1| hypothetical protein B0285.6 [Caenorhabditis elegans] [NCBI NR]
  • gi|15718035|emb|CAA84299.2| C. elegans protein B0285.6, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • Uncharacterized transporter B0285.6 OS=Caenorhabditis elegans GN=B0285.6 PE=3 SV=2 [Swiss-Prot]
  • [wormpep67.fasta]
  • CE28526 WBGene00007138 Yeast ORF YCS7_YEAST status:Partially_confirmed SW:P46556 protein_id:CAA84299.2 [wormpep150.fasta]
  • 28526 WBGene00007138 Yeast ORF YCS7_YEAST status:Partially_confirmed SW:P46556 protein_id:CAA84299.2 [wormpep130-phg-ecoli-orf-rand.fasta]
  • solute carrier family 13 member (3F445) [Caenorhabditis elegans]gi|15718035|emb|CAA84299.2| Hypothetical protein B0285.6 [Caenorhabditis elegans]gi|21431899|sp|P46556|YKG6_CAEEL Hypothetical protein B0285.6 in chromosome III [nrdb_11152004_Chlamydomonas]
  • Yeast ORF YCS7_YEAST status:Partially_confirmed SW:P46556 protein_id:CAA84299.2 [wormpep115.fasta.reversed]
  • CE28526 Yeast ORF YCS7_YEAST status:Predicted SW:P46556 protein_id:CAA84299.2 [wormpep80.hongbin]
  • CE28526 WBGene00007138 Yeast ORF YCS7_YEAST status:Partially_confirmed UniProt:YKG6_CAEEL protein_id:CAA84299.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE28526 WBGene00007138 Yeast ORF YCS7_YEAST status:Partially_confirmed UniProt:YKG6_CAEEL protein_id:CAA84299.2| [wormORF-contam.fasta]
  • Hypothetical protein B0285.6 in chromosome III [nr-271106-contam.fasta]
  • B0285.6 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein B0285.6 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE28526 WBGene00007138 Yeast ORF YCS7_YEAST status:Partially_confirmed UniProt:P46556 protein_id:CAA84299.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE28526 WBGene00007138 status:Partially_confirmed UniProt:P46556 protein_id:CAA84299.2 Uncharacterized transporter B0285.6 [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 577 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    integral to membrane [IEALink to PubMed article]
    Biological Process: sodium ion transport [IEALink to PubMed article]
    citrate transport [IEALink to PubMed article]
    Molecular Function: citrate transmembrane transporter activity [IEALink to PubMed article]
    transporter activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILIINNTFD IDQKGFYFEK KVNLKFQLSN DKLWHRSLEG KCAFVILTMS CYWVAEVVPL  60
   61 AVTSFIPMIA LPFLGIVSIK EVAPKYFADT NIVFFNSLML SLAVEECQLH KRIALKMLTY 120
  121 VGTRPHWLMA GFMIITSFIS LWISDTACCA LMAPIAYALL EEIMIPKMRP EEKENEIEVM 180
  181 KIFDKEDPEE KEKKKLDTSR LSVRDRGICK CMMLLVAHAS LIGGTGTINS TGPNLIFRDN 240
  241 IEKNFPNEDH GISYLSWMAF AIPPMIFYMF SSWFIVQLQF LGPRHLMGMF REPTETEKQE 300
  301 EEVAKRAVWK SYDQLGPMTW AEKSTLVIFV LAVLSWVSSD PKVIPGWSDL FRKGYVTDSC 360
  361 SGLVAVFLLF IWPKKKPDFR IFRKDKSRPS VRQEPLIDWD CVRRRFPWSI ILLLGAGFAI 420
  421 SDAVRVSGLS SLIACSLNST ISKMPFFVMQ IILSIVVVVM TEFSTNSATA SIFIPISFKM 480
  481 AEAVGAHPLY FSIPTAIGPS FSFMLPMATP ANAIVYETKT IRMIDMVSCG VFLNIFCIAI 540
  541 TAINMNTWAF WLFNMGTYPD YALRHATNMT GNSSQCF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..195] MSA 6.349992 View MSA. No confident structure predictions are available.
    2 View Details [196..352] deduced N/A No confident structure predictions are available.
    3 View Details [353..577] MSA 11.484997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle