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Protein Overview: CE28457

General Information:
Name(s) found: CE28457 [WormBase]
Description(s) found:
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  • WBGene00018905 status:Partially_confirmed UniProt:Q20851 protein_id:CCD69399.1 [WormBase]
  • gi|17540670|ref|NP_501206.1| hypothetical protein F55G1.12 [Caenorhabditis elegans] [NCBI NR]
  • gi|14916316|gb|AAB00652.2| Hypothetical protein F55G1.12 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE28457 WBGene00018905 status:Partially_confirmed TR:Q20851 protein_id:AAB00652.2 [wormpep150.fasta]
  • 28457 WBGene00018905 status:Partially_confirmed TR:Q20851 protein_id:AAB00652.2 [wormpep130-phg-ecoli-orf-rand.fasta]
  • sodium channel family member (4I260) [Caenorhabditis elegans]gi|14916316|gb|AAB00652.2| Hypothetical protein F55G1.12 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • status:Partially_confirmed TR:Q20851 protein_id:AAB00652.2 [wormpep115.fasta.reversed]
  • CE28457 status:Partially_confirmed TR:Q20851 protein_id:AAB00652.2 [wormpep80.hongbin]
  • CE28457 WBGene00018905 status:Partially_confirmed UniProt:Q20851_CAEEL protein_id:AAB00652.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE28457 WBGene00018905 status:Partially_confirmed UniProt:Q20851_CAEEL protein_id:AAB00652.2| [wormORF-contam.fasta]
  • F55G1.12 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein F55G1.12 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE28457 WBGene00018905 status:Partially_confirmed UniProt:Q20851 protein_id:AAB00652.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
    • Organism: Caenorhabditis elegans
    Length: 266 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    integral to membrane [IEALink to PubMed article]
    Biological Process: sodium ion transport [IEALink to PubMed article]
    ion transport [IEALink to PubMed article]
    Molecular Function: ion channel activity [IEALink to PubMed article]
    sodium channel activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSSFKYEAR SSGYPGGLEM QMNVKQDEYL PWTETAGVMV FTSTKEEAVT SESVRINTAP  60
   61 HFESRIAINR VDYYRLGGRY GVCINSVSEV KSYYYDGDYT TDGCLRSCYQ DVVNGDCGCM 120
  121 DPRYPMPNDG ISCSISQKTC IDELVDSRGD PSTWPECTCP LPCSQTVYTS KLSRLPYVNK 180
  181 IVDCEEAYTN KTACYETFLD SVILRISLPK LDYMIYSETP AMDLTKFMSY LGGILSILIG 240
  241 VSIVSFVELF FLFVQLIVIL LFNKRL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-2 hcp2 ip from december Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..266] PSI-BLAST 63.39794 No description for 2qtsA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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