YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE28457
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSSFKYEAR SSGYPGGLEM QMNVKQDEYL PWTETAGVMV FTSTKEEAVT SESVRINTAP  60
   61 HFESRIAINR VDYYRLGGRY GVCINSVSEV KSYYYDGDYT TDGCLRSCYQ DVVNGDCGCM 120
  121 DPRYPMPNDG ISCSISQKTC IDELVDSRGD PSTWPECTCP LPCSQTVYTS KLSRLPYVNK 180
  181 IVDCEEAYTN KTACYETFLD SVILRISLPK LDYMIYSETP AMDLTKFMSY LGGILSILIG 240
  241 VSIVSFVELF FLFVQLIVIL LFNKRL

Type	Start	End	Confidence
Cytoplasmic	1	229	0.60
Transmembrane Helix	230	259	0.80
Non-Cytoplasmic	260	266	0.53