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Protein Overview: prp-17

General Information:
Name(s) found: prp-17 / CE28405 [WormBase]
Description(s) found:
Found 19 descriptions.
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  • WBGene00018625 locus:prp-17 status:Confirmed UniProt:O44729 protein_id:CCD71532.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 567 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: locomotory behavior [IMPLink to PubMed articleLink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed article]
    post-embryonic body morphogenesis [IMPLink to PubMed article]
    gastrulation with mouth forming first [IMPLink to PubMed article]
    growth [IMPLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDALQAYGGS DSEHSDDDAS MDQVAKGKSS TLLERAIVTA PDVESKSAIR QVAIVDPKTK  60
   61 EIKSNPKFDQ LFKPESGPVN HFKSEQQRSQ KNTLTGFVEP AHLNEFHFNR QIRSFDTLGY 120
  121 AQNPTAESGT THFVGDVKKA EAEKGVSLFE SKKTGGEKRK RVRNDDSADI DGYTGPWSRF 180
  181 IDEKTVAKPT PELQKQMDEI VKKRQEKSRR FKKEKEDSEQ MAEESSTLHL KEAEDYQGRS 240
  241 FLVPPSFTGV NLREDYVPER CFVPKKLVHT YRGHNKGVNF LQWFPKSAHL FLSCSMDTKI 300
  301 KLWEVYDRQR VVRTYAGHKL PVREVAFNNE GTEFLSASFD RYVKLWDTET GQVKQRFHTG 360
  361 HVPYCLKYHP DDDKNHMFLV GMQNKKIIQW DSRSGEIVQE YDRHLQAVNS ITFFDKNRRF 420
  421 ASTSDDKSVR IWEWEIPVDT KLIQNVGLHA IPTMTKSPND KWVVGQCMDN RIVLFQLVDD 480
  481 KLRFSKKKAF RGHNAAGYAC NIDFSPDQSF LISGDADGKL FIWDWRTHKI VGKWKAHDST 540
  541 CIAALWHPHE KSRMITAGWD GLIKMWN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..102] deduced N/A No confident structure predictions are available.
    2 View Details [103..262] PSI-BLAST 5.045757 No description for 2ojhA was found.
    3 View Details [263..567] PSI-BLAST 79.0 No description for 2gnqA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle