| Protein: | prp-17 |
| Organism: | Caenorhabditis elegans |
| Length: | 567 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for prp-17.
| Description | E-value | Query Range |
Subject Range |
|
|
551.0 | [0..4] | [567..1187] |
|
Region A: Residues: [1-102] |
1 11 21 31 41 51
| | | | | |
1 MDALQAYGGS DSEHSDDDAS MDQVAKGKSS TLLERAIVTA PDVESKSAIR QVAIVDPKTK 60
61 EIKSNPKFDQ LFKPESGPVN HFKSEQQRSQ KNTLTGFVEP AH
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [103-262] |
1 11 21 31 41 51
| | | | | |
1 LNEFHFNRQI RSFDTLGYAQ NPTAESGTTH FVGDVKKAEA EKGVSLFESK KTGGEKRKRV 60
61 RNDDSADIDG YTGPWSRFID EKTVAKPTPE LQKQMDEIVK KRQEKSRRFK KEKEDSEQMA 120
121 EESSTLHLKE AEDYQGRSFL VPPSFTGVNL REDYVPERCF
|
| Detection Method: | |
| Confidence: | 5.045757 |
| Match: | 2ojhA |
| Description: | No description for 2ojhA was found. |
|
Region A: Residues: [263-567] |
1 11 21 31 41 51
| | | | | |
1 VPKKLVHTYR GHNKGVNFLQ WFPKSAHLFL SCSMDTKIKL WEVYDRQRVV RTYAGHKLPV 60
61 REVAFNNEGT EFLSASFDRY VKLWDTETGQ VKQRFHTGHV PYCLKYHPDD DKNHMFLVGM 120
121 QNKKIIQWDS RSGEIVQEYD RHLQAVNSIT FFDKNRRFAS TSDDKSVRIW EWEIPVDTKL 180
181 IQNVGLHAIP TMTKSPNDKW VVGQCMDNRI VLFQLVDDKL RFSKKKAFRG HNAAGYACNI 240
241 DFSPDQSFLI SGDADGKLFI WDWRTHKIVG KWKAHDSTCI AALWHPHEKS RMITAGWDGL 300
301 IKMWN
|
| Detection Method: | |
| Confidence: | 79.0 |
| Match: | 2gnqA |
| Description: | No description for 2gnqA was found. |
