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Protein Overview: vbh-1

General Information:
Name(s) found: vbh-1 / CE28369 [WormBase]
Description(s) found:
Found 17 descriptions.
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  • WBGene00006888 locus:vbh-1 status:Confirmed UniProt:Q95XY1 protein_id:CCD72827.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 644 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed article]
    DNA recombination [IEALink to PubMed article]
    Molecular Function: nucleic acid binding [IEALink to PubMed article]
    ATP binding [IEALink to PubMed article]
    ATP-dependent helicase activity [IEALink to PubMed article]
    helicase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTQYYANHN GQQQPPQQQQ GQGWSSSYSQ QSNNMPAGGV FYNGFANGTP SNNGSSGYNN  60
   61 FADSGNGFNN KRYSGAESNQ WGGAPAEYSE SNLFHRTDSG INFDKYENIP VEVSGDSVPA 120
  121 AIEHFNEAGF GPAVMENVNR SGYSKPTPVQ KHSIPTLLAN RDLMSCAQTG SGKTAAFLLP 180
  181 IIQHILAGGP DMVKPPAFTN GRRTYYPCAL VLSPTRELAI QIHKEATKFS YKSNIQTAIL 240
  241 YGGRENYRDQ VNRLRAGTHI LIATPGRLID IIEQGFIGLA GCRYLVLDEA DRMLDMGFEP 300
  301 QIRKIVGQGM PPKTARTTAM FSATFPKEIQ VLAKDFLKDN YIFLAVGRVG STSENIEQRL 360
  361 LWVNEMEKRS NLMEILMNEH SENLVLVFVE TKRGANELAY FLNRQQIRSV SIHGDLKQIE 420
  421 RERNLELFRS GQCPILVATA VAARGLDIPN VRHVINYDLP GDSDEYVHRI GRTGRCGNLG 480
  481 IATSFFNDKN RGIGRDLKNL IVESNQEVPE WLHQVAAEGR IGGGQRGGNR RFGATDYRVG 540
  541 RGGGGSFGGN FSNYNSGGAT GGFGSGPAYG GSFGGGAPRR PFTNGGFGAH SSLSSTSNSG 600
  601 GGGGFSGPRR GGFNSGMNRQ GGGGGGFYSN PGQAPIDHWQ APQA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..122] deduced N/A No confident structure predictions are available.
    2 View Details [123..518] PSI-BLAST 103.0 No description for 2i4iA was found.
    3 View Details [519..644] PSI-BLAST 21.69897 Nucleotide excision repair enzyme UvrB


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle