Protein Overview: ama-1

General Information:
Name(s) found:	ama-1 / CE28300 [WormBase]
Description(s) found: Found 18 descriptions. SHOW ALL	WBGene00000123 locus:ama-1 RNA polymerase II status:Partially_confirmed UniProt:P16356 protein_id:AAA96158.2 [WormBase]
Organism:	Caenorhabditis elegans
Length:	1852 amino acids
Gene Ontology:
Cellular Component:	nucleus [IDA ][IEA] DNA-directed RNA polymerase II, core complex [IEA]
Biological Process:	embryonic cleavage [IMP] spindle organization [IMP] transcription [IEA][IMP] embryonic development ending in birth or egg hatching [IMP ] positive regulation of growth rate [IMP] transcription from RNA polymerase II promoter [IEA] reproduction [IMP] gastrulation [IMP]
Molecular Function:	DNA binding [IEA] zinc ion binding [IEA] DNA-directed RNA polymerase activity [IEA][ISS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALVGVDFQA PLRIVSRVQF GILGPEEIKR MSVAHVEFPE VYENGKPKLG GLMDPRQGVI  60
   61 DRRGRCMTCA GNLTDCPGHF GHLELAKPVF HIGFLTKTLK ILRCVCFYCG RLLIDKSAPR 120
  121 VLEILKKTGT NSKKRLTMIY DLCKAKSVCE GAAEKEEGMP DDPDDPMNDG KKVAGGCGRY 180
  181 QPSYRRVGID INAEWKKNVN EDTQERKIML TAERVLEVFQ QITDEDILVI GMDPQFARPE 240
  241 WMICTVLPVP PLAVRPAVVT FGSAKNQDDL THKLSDIIKT NQQLQRNEAN GAAAHVLTDD 300
  301 VRLLQFHVAT LVDNCIPGLP TATQKGGRPL KSIKQRLKGK EGRIRGNLMG KRVDFSARTV 360
  361 ITADPNLPID TVGVPRTIAQ NLTFPEIVTP FNVDKLQELV NRGDTQYPGA KENGARVDLR 420
  421 YHPRAADLHL QPGYRVERHM KDGDIIVFNR QPTLHKMSMM GHRVKILPWS TFRMNLSVTS 480
  481 PYNADFDGDE MNLHLPQSLE TRAEIEEIAM VPRQLITPQA NKPVMGIVQD TLCAVRMMTK 540
  541 RDVFIDWPFM MDLLMYLPTW DGKVPQPAIL KPKPLWTGKQ VFSLIIPGNV NVLRTHSTHP 600
  601 DSEDSGPYKW ISPGDTKVII EHGELLSGIV CSKTVGKSAG NLLHVVTLEL GYEIAANFYS 660
  661 HIQTVINAWL IREGHTIGIG DTIADQATYL DIQNTIRKAK QDVVDVIEKA HNDDLEPTPG 720
  721 NTLRQTFENK VNQILNDARD RTGSSAQKSL SEFNNFKSMV VSGSKGSKIN ISQVIACVGQ 780
  781 QNVEGKRIPF GFRHRTLPHF IKDDYGPESK GFVENSYLAG LTPSEFFFHA MGGREGLIDT 840
  841 AVKTAETGYI QRRLIKAMES VMVNYDGTVR NSLAQMVQLR YGEDGLDGMW VENQNMPTMK 900
  901 PNNAVFERDF RMDLTDNKFL RKNYSEDVVR EIQESEDGIS LVESEWSQLE EDRRLLRKIF 960
  961 PRGDAKIVLP CNLQRLIWNA QKIFKVDLRK PVNLSPLHVI SGVRELSKKL IIVSGNDEIS1020
 1021 KQAQYNATLL MNILLRSTLC TKNMCTKSKL NSEAFDWLLG EIESRFQQAI AQPGEMVGAL1080
 1081 AAQSLGEPAT QMTLNTFHYA GVSAKNVTLG VPRLKEIINV SKTLKTPSLT VFLTGAAAKD1140
 1141 PEKAKDVLCK LEHTTLKKVT CNTAIYYDPD PKNTVIAEDE EWVSIFYEMP DHDLSRTSPW1200
 1201 LLRIELDRKR MVDKKLTMEM IADRIHGGFG NDVHTIYTDD NAEKLVFRLR IAGEDKGEAQ1260
 1261 EEQVDKMEDD VFLRCIEANM LSDLTLQGIP AISKVYMNQP NTDDKKRIII TPEGGFKSVA1320
 1321 DWILETDGTA LLRVLSERQI DPVRTTSNDI CEIFEVLGIE AVRKAIEREM DNVISFDGSY1380
 1381 VNYRHLALLC DVMTAKGHLM AITRHGINRQ EVGALMRCSF EETVDILMEA AVHAEEDPVK1440
 1441 GVSENIMLGQ LARCGTGCFD LVLDVEKCKY GMEIPQNVVM GGGFYGSFAG SPSNREFSPA1500
 1501 HSPWNSGVTP TYAGAAWSPT TGGMSPGAGF SPAGNTDGGA SPFNEGGWSP ASPGDPLGAL1560
 1561 SPRTPSYGGM SPGVYSPSSP QFSMTSPHYS PTSPSYSPTS PAAGQSPVSP SYSPTSPSYS1620
 1621 PTSPSYSPTS PSYSPTSPSY SPTSPSYSPT SPSYSPSSPS YSPSSPSYSP SSPRYSPTSP1680
 1681 TYSPTSPTYS PTSPTYSPTS PTYSPTSPSY ESGGGYSPSS PKYSPSSPTY SPTSPSYSPT1740
 1741 SPQYSPTSPQ YSPSSPTYTP SSPTYNPTSP RGFSSPQYSP TSPTYSPTSP SYTPSSPQYS1800
 1801 PTSPTYTPSP SEQPGTSAQY SPTSPTYSPS SPTYSPASPS YSPSSPTYDP NS

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Protein Overview: ama-1

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: