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Protein Overview: CE28256

General Information:
Name(s) found: CE28256 [WormBase]
Description(s) found:
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  • WBGene00011705 status:Partially_confirmed UniProt:G5EEZ6 protein_id:CAA96686.2 [WormBase]
  • gi|25155190|ref|NP_741604.1| hypothetical protein T11A5.6 [Caenorhabditis elegans] [NCBI NR]
  • gi|14530545|emb|CAA96686.2| C. elegans protein T11A5.6, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|14530367|emb|CAC42267.1| C. elegans protein T11A5.6, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE28256 WBGene00011705 calpain status:Partially_confirmed TR:Q22386 protein_id:CAA96686.2 [wormpep150.fasta]
  • 28256 WBGene00011705 calpain status:Partially_confirmed TR:Q22386 protein_id:CAA96686.2 [wormpep130-phg-ecoli-orf-rand.fasta]
  • small optic lobes homolog (5K366) [Caenorhabditis elegans]gi|14530367|emb|CAC42267.1| Hypothetical protein T11A5.6 [Caenorhabditis elegans]gi|14530545|emb|CAA96686.2| Hypothetical protein T11A5.6 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • calpain status:Partially_confirmed TR:Q22386 protein_id:CAA96686.2 [wormpep115.fasta.reversed]
  • CE28256 calpain status:Partially_confirmed TR:Q22386 protein_id:CAA96686.2 [wormpep80.hongbin]
  • CE28256 WBGene00011705 calpain status:Partially_confirmed UniProt:Q22386_CAEEL protein_id:CAC42267.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE28256 WBGene00011705 calpain status:Partially_confirmed UniProt:Q22386_CAEEL protein_id:CAC42267.1| [wormORF-contam.fasta]
  • Hypothetical protein T11A5.6 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • T11A5.6 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE28256 WBGene00011705 calpain status:Partially_confirmed UniProt:Q22386 protein_id:CAC42267.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE28256 WBGene00011705 calpain status:Partially_confirmed UniProt:G5EEZ6 protein_id:CAA96686.2 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE28256 WBGene00011705 status:Partially_confirmed UniProt:G5EEZ6 protein_id:CAA96686.2 [wormpep246-ecoli-contam.fasta]
  • Uncharacterized protein OS=Caenorhabditis elegans GN=CELE_T11A5.6 PE=4 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 718 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEALink to PubMed article]
    Biological Process: proteolysis [IEALink to PubMed article]
    Molecular Function: zinc ion binding [IEALink to PubMed article]
    calcium-dependent cysteine-type endopeptidase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEMTAWNCLY CTLINDPAIF ICQGCGSQKP LTKKPAKLTG SFPKIITDTV RDVSNAISDL  60
   61 VNNRDRSPAH NFVRATHFRT PLPNGPFVDG QSNDPRDTHQ LSMCSKITTT LKQEAEKKSD 120
  121 VIYSNIISYC KSSNSPFIDD SFLHNKKSIG SLQFTKNGVK RHEEPDFLNW LRPSQMFTKD 180
  181 GRSSPWSVLN NPRPSDIEQG TLVGDCWLMS AMALIAERPD VLDDIIPKKQ YSHYGVYQIK 240
  241 LCVEGKWEVI IVDDFFPCYS KTNSIAMAVG RRNQLWVPLI EKAMAKVLGS YSKLHGASLA 300
  301 QGLSMLTGAS CVNYNCPPIP SSVDDVDTFW AQLVSSKESG FLMCCHCGAF ENVVAEAEFK 360
  361 AMGLLTNHAY SILDVIYEQG YRLLRIRNPW GQFVWNGKWS DGWPGWPIGM KQKFLNQRKD 420
  421 ETGAFWMDLE DFVARFASVT VCKLRMDWSE LRVTHKVGGH SDTALQIVIT DTCEVSVTAF 480
  481 QKGAFNKKDN LNDLMVCVHR ISGDRRIGEL IEMSSRISDN HFTIDEFFLA PGEYQIVCHS 540
  541 QSSLLTNKKG VVNMVVHTRY PIFGEYIPMS PRTRMESLHH VIIKEGDIVK NTNDGVVIRT 600
  601 LTRKFRGMII MADNCLEKKY LHVGVDCSQS MNIQSSRGFL QVVDVVPPLC RQVLLVLSTI 660
  661 DDSAQYRVSN SLKTLVHRSK CLLPEMWYEA AISAPNAQHY PLLNTSSFDP IHSTVSVF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..88] MSA 8.089992 View MSA. No confident structure predictions are available.
    2 View Details [89..718] PSI-BLAST 159.0 Crystal Structure of a mu-like calpain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.482343911625985 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle