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Protein Overview: asc-1

General Information:
Name(s) found: asc-1 / CE28135 [WormBase]
Description(s) found:
Found 19 descriptions.
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  • WBGene00000208 locus:asc-1 status:Confirmed UniProt:G5EDK1 protein_id:CAB70106.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 425 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    Biological Process: dauer larval development [IDALink to PubMed article]
    regulation of transcription [IEALink to PubMed article]
    Molecular Function: zinc ion binding [IEALink to PubMed article]
    transcription regulator activity [IEALink to PubMed article]
    transcription activator activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKKQAGGKG GVAGRQNVLA AKTEISFADT LRKGRHECLC QARTHKLILN CLGCGRIVCE  60
   61 QEGSGPCFTC GTLVCTREER EILNRGTNKS RDLLARLTGD GSDIGSLKQI SSSYQNATEF 120
  121 RNKLLEADAD TERRTKVNDL QSDYSTIENS PFLSASDREA LKLRREELKA LREKERKKFV 180
  181 VSLDFDGGVV HEMTRRSGTE ALQDKNDPVI QRIMERVDEK HRIQEALHNS TADARWNPIG 240
  241 FVPRYMTEDG DHPQQECSDG DIIDADSLMI VSDELAAQIT EEKGYVLALA QPTASFLVNG 300
  301 LCRFIRWPTD LNLKGPLFIT AKAGGTNEKM IREFAKKYVR DVNKISELDF SDGAVLGRAF 360
  361 LQECMMLEDF LDKYGSKSAI PGGDGQFVLC FSAFEPLVST IPHISTADSY IYEMDRQLKR 420
  421 SLTKW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..147] FFAS03 1.34 Crystal Structure of a FYVE-type domain from caspase regulator CARP2
    2 View Details [148..271] MSA 1.043988 View MSA. No confident structure predictions are available.
    3 View Details [272..347] PSI-BLAST 4.39794 No description for 2dp9A was found.
    4 View Details [348..425] MSA 2.047989 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.148252783584283 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle