Protein Overview: hcp-6

General Information:
Name(s) found:	hcp-6 / CE28104 [WormBase]
Description(s) found: SHOW ONLY BEST	WBGene00001833 locus:hcp-6 status:Partially_confirmed UniProt:Q95Y84 protein_id:CCD66190.1 [WormBase] gi\|17510907\|ref\|NP_491537.1\| HoloCentric chromosome binding Protein family member (hcp-6) [Caenorhabditis elegans] [NCBI NR] gi\|14578241\|gb\|AAK68883.1\|AC006708_12 Holocentric chromosome binding protein protein 6, isoform b [Caenorhabditis elegans] [NCBI NR] [wormpep67.fasta] CE28104 WBGene00001833 locus:hcp-6 status:Partially_confirmed TR:Q95Y84 protein_id:AAK68883.1 [wormpep150.fasta] 28104 WBGene00001833 locus:hcp-6 status:Partially_confirmed TR:Q95Y84 protein_id:AAK68883.1 [wormpep130-phg-ecoli-orf-rand.fasta] putative protein, with 2 coiled coil-4 domains, of eukaryotic origin, HoloCentric chromosome binding Protein HCP-6 (hcp-6) [Caenorhabditis elegans]gi\|14578241\|gb\|AAK68883.1\| Holocentric chromosome binding protein protein 6, isoform b [Caenorhabditis eleg [nrdb_11152004_Chlamydomonas] locus:hcp-6 status:Partially_confirmed TR:Q95Y84 protein_id:AAK68883.1 [wormpep115.fasta.reversed] CE28104 status:Partially_confirmed TR:Q95Y84 protein_id:AAK68883.1 [wormpep80.hongbin] CE28104 WBGene00001833 locus:hcp-6 status:Partially_confirmed UniProt:Q95Y84_CAEEL protein_id:AAK68883.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta] CE28104 WBGene00001833 locus:hcp-6 status:Partially_confirmed UniProt:Q95Y84_CAEEL protein_id:AAK68883.1\| [wormORF-contam.fasta] Holocentric chromosome binding protein protein 6, isoform b [Caenorhabditis elegans] [nr-271106-contam.fasta] HoloCentric chromosome binding Protein family member (hcp-6) [Caenorhabditis elegans] [nr-271106-contam.fasta] CE28104 WBGene00001833 locus:hcp-6 status:Partially_confirmed UniProt:Q95Y84 protein_id:AAK68883.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta] [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr] CE28104 WBGene00001833 locus:hcp-6 status:Partially_confirmed UniProt:Q95Y84 protein_id:CCD66190.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta] HoloCentric chromosome binding Protein OS=Caenorhabditis elegans GN=hcp-6 PE=1 SV=1 [CAEEL.fasta.20160308]
Organism:	Caenorhabditis elegans
Length:	1758 amino acids
Gene Ontology:
Cellular Component:	condensed chromosome [IDA ] condensed chromosome, centromeric region [IDA ] condensin complex [IDA][ISS] nucleoplasm [IDA]
Biological Process:	mitotic chromosome condensation [IMP] embryonic development ending in birth or egg hatching [IMP ] mitotic sister chromatid segregation [IMP] attachment of spindle microtubules to kinetochore involved in mitotic sister chromatid segregation [IMP]
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNINEKDLS EFLESNLRSL NDIDDAVATS SAECNYEDYE EFTNSVDLTF FEQDLSGVLK  60
   61 ELKKLAESVV ISGKKCDIRN IFEESDVATM KFNLFVWYFL ENGQRSDSSE EDVDKGVSAA 120
  121 SSYIAMCSLP GAISDLYQIG LYNQCLKIIR NCCHTVRIGE TVVTKKSSGA KKKKAGGKSD 180
  181 ETNVDGEMTV TTGAADPIIG PPRIAVDSAE RYLHHLTTQL FAFLHSNTFS IDTPTLMSTL 240
  241 EVVEDIGRLD LDNRTAGRAI RANSVHEFRS LERFTDRYCA FVHSLVESKY KTRAEVAYGR 300
  301 LIRPRLALMP YPDESNKSSK ISTERKRSGE LHVNLILSRI SRNPEARELK YIQTVTVMVY 360
  361 SQCPDLAEFR TNIATFIHKI LEALPYTYTY DFVQFMNVLF KGRGAGVKSL STELSSILIS 420
  421 SFDFTAPDPG AIPNLDAEQN EEEDEEEEGE DEEEEEENEQ DDVAVKEEEQ SDKSDEENDG 480
  481 DNEENVSKKK EEKKKEKKAK EVKEVGRMDA MSVLYNIVYM ACLDKAAAMR LHGANSLTKI 540
  541 LQSQSHREAF QLFCATINAE MDEKFGAVGD NLSESLEDLN VSGKAPSSKT KKPTDLLLDE 600
  601 QQIIQKFNKL KLMNKGETRV EKDIVYMIVR RLSTDDKAPV KKAACSLLKS YLSYCDEASK 660
  661 FEVVLSILQM LCRDRMVSVR KTGADAFTEL MLRDAILFKE SLSSKWLHTL ISMLNDTDND 720
  721 VTEHARKLIM KVLTPLLENS SDLTWTLLDT IESVTNHRQY LMSTLKDAVR EKLVKRTVMD 780
  781 SMKQHIISGS EKLDGAWMVF SQLCVQFEQN VDFAIETFSR VDLSRESNLV QYMIHVIENN 840
  841 IKKIDDDTKS DLVNTLQGTF RDYCLHPSHS RSIYHCLGKL MDGIGDRSLH GKEFSDFGET 900
  901 LLIKCFDTIV QSFEMFKDKD EWKRNSESQE RLLCTALNVA SEVFSYSPQL VPRHERLGKT 960
  961 LSLIVNSTEN GSSDASTVNP DMPSVHHTRP PTQLSEVPSS QKSSKGGMMS HEGAMFSDKV1020
 1021 RAVGVVTLAN MILAHDRLLK LMPMLVKQLQ YNTAHQIRSN IVLAIGDICS SYKTDRYAPM1080
 1081 LAASLCDPSV IVRRHAINQI ARLISFGIFR FNGEIMIRMM LASLDANEDV RNDAKLYISE1140
 1141 VLQSEEPNFF PLNFVQYMIA LTQARRLVGV GHDEDDRGQV DVAIGGGDPL ARPSRIAIYT1200
 1201 FMIDSLDDRS RFDVKMSICQ RIFTPIVNGE YDFSDYNVQC LLDDALLIMA SNEMQVKMDV1260
 1261 GKNPNENAMD DPSPEVLEAA TGFMQKVYLD HYMKTIVPSI LSLREFLNQH RSPLQRKCLL1320
 1321 AIRMICIEHK NDIDEILQDN RQLKDEMMFE LQRVKQRTEE ANRILDEYLK RVAEFKKQQK1380
 1381 RLSKSPAPME LDAEPVQESA EAVEMGSPAR RIEEDQENVE EEVEMRTPQK KNPDADVPRT1440
 1441 PLNALRSTTE EKSTPNARLL SPKTIKKIRR SLGALIHTEM RLNPPNLEET KIDDTTINRS1500
 1501 KQADKTEEKT IVEEEPMEEA AAEKTVTAEN DHVDAEKTVI AVEIPPATEA EEDEVVDVQS1560
 1561 ESRRSRRRKT PNYDDEESVD ADGKIWKKPK IVNKSPEKEV NISANVTLRR SRRGQSTEPP1620
 1621 VVKENSNRKR KSVDEEEENV PTSSSGNTEN DPLSRGVTPL IFDESKLGAG RHCSTPIRSR1680
 1681 EDADPSDVTF SLNLSAITEK EDLKNRSKKV KLITFTISSK RMKRKADQCH CINLPSKFVL1740
 1741 FISTVCIIVR LSAVFSLN

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

The following runs contain data for this protein:

	BAIT	COMMENTS	PUBLICATION
View Run	hcp-1	hcp1 IP from december2004	Cheeseman, I.M., et al. (2005)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.81

Protein Overview: hcp-6

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: