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Protein Overview: osm-6

General Information:
Name(s) found: osm-6 / CE27774 [WormBase]
Description(s) found:
Found 21 descriptions.
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  • WBGene00003886 locus:osm-6 status:Confirmed UniProt:G5EDF6 protein_id:CAB61026.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 472 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDA]
    neuronal cell body [IDA]
    Biological Process: chemotaxis [IMP]
    cilium morphogenesis [IMP]
    positive regulation of growth rate [IMP]
    response to osmotic stress [IMP]
    sensory perception of mechanical stimulus [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPFSDEKMT NRSIGRKVLI DQSKQQQISL ISGFRGVARH LKSVLTVEIN TEPINLNGLE  60
   61 DVRMLIIPQP KTSFGTGEIE AIWKFVEEGG SLMILSGEGG ERQSLNEMIA KYGITVNKDS 120
  121 VIRTVFLKYF DPKEALVANG VINRAIAVAA KKNVSTEQKH NSQALSFIYP YGCTLDVNNR 180
  181 MSNVVLSSGS TSFPTSRPVA AFHETKLNEM KKKGRVCVVG SVSMFHDTYI DKEENGKIFD 240
  241 TFVEFLVNGL ELNTIDAAEP EINDYTNIPD HIHMSQQIKV CMYEGELDQA ISSDFMKIMD 300
  301 TSLHSFNLKH WPMTIRLYEA LNLSPPPLTL VEPQFELPMP PFQPAVFPPT FQELPMPPLE 360
  361 LFDLDEQFSS PEIQLSQLAN RSEEEDLIFF IEKAGEITGI SAELTRSERT PKKIIELAVS 420
  421 KLMLFKRSMM DGELEVASAF DIGEHDAHHQ SFNQGEEMDE QLFSDIDEFD DL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..163] MSA 5.184994 View MSA. No confident structure predictions are available.
    2 View Details [164..267] MSA 3.179986 View MSA. No confident structure predictions are available.
    3 View Details [268..328] MSA 2.071994 View MSA. No confident structure predictions are available.
    4 View Details [329..472] MSA 1.051971 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle