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Protein Overview: CE27718

General Information:
Name(s) found: CE27718 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00015993 status:Confirmed UniProt:Q9GZF5 protein_id:CCD63288.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 425 amino acids

    Gene Ontology:
    Cellular Component: proteinaceous extracellular matrix [IEALink to PubMed article]
    Biological Process: extracellular matrix organization [IEALink to PubMed article]
    Molecular Function: collagen binding [IEALink to PubMed article]
    extracellular matrix structural constituent [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQQIYLLSLV GALAALAVVV HAQTTPLFPV ACELNVLIVL DRSDSVKGGF NKSRKFVTDV  60
   61 SEELQIGPEK HRVALIVYSG LSYRREVMPW NFAKSNEEFV RKVNALRAIG GTTNTKKALE 120
  121 VGLELMAQRN VSIPTLVMVV TDGRSADDPK GPGQILQAQP NTWVFAAATG DPEKVDTREL 180
  181 MDITGNINHI VMHRGRDLAT DITRRLLRQA QDKCRTTTTT TTTTTTTTTT DPITGCELDL 240
  241 VLVLDFSTTT DPVYNSYKDL SKRLVSQLKI GPHYTQVAAV TFATVGRTRV RFNLKKYQTQ 300
  301 EEVLRGIDNL KSRGGTTAIG AGIEKALTQL DESEGARPGI ATKVMVVFTD GWSNKGPDPE 360
  361 KRARDAVSSG FEMYTVAYTA HTPGAVTLNN ETLSAISGDV HHTFTDVTFQ ALIDKIKQRN 420
  421 LPCMP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..217] PSI-BLAST 35.30103 The mouse von Willebrand Factor A1-botrocetin complex
    2 View Details [218..425] PSI-BLAST 35.154902 No description for 2b2xA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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